FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_GyrBDve252.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_GyrBDve252.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3696
Sequences flagged as poor quality0
Sequence length301
%GC67

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACCGTGGAGGCCGCCGGACACCTTGTACGAGTTGTCGTCGAACTTACC90.2435064935064935No Hit
ACGCCGTGGAGGCCGCCGGACACTTTGTAGCTGTTGTCGTCGAACTTGCC70.1893939393939394No Hit
ACGCCGTGGAGGCCGCCGGACACCTTGTACGAGTTGTCGTCGAACTTACC70.1893939393939394No Hit
ACCCCGTGGAGGCCGCCGGACACCTTGTACGAGTTGTCGTCGAACTTACC60.16233766233766234No Hit
ACGCCGTGGAAGCCGCCGGACACCTTGTACGAGTTGTCGTCGAACTTACC60.16233766233766234No Hit
ACGCCGTGGAAGCCGCCGGACACTTTGTAGCTGTTGTCGTCGAACTTGCC50.13528138528138528No Hit
ACGCCATGGAGGCCGCCGGACACCTTGTACGAGTTGTCGTCGAACTTACC50.13528138528138528No Hit
ACGCCATGGAGTCCGCCGGACACCTTGTACGAGTTGTCGTCGAACTTACC50.13528138528138528No Hit
ACACCGTGGAGGCCGCCGGACACTTTGTAGCTGTTGTCGTCGAACTTGCC40.10822510822510822No Hit
ACACCGTGAAGGCCGCCGGACACCTTGTACGAGTTGTCGTCGAACTTACC40.10822510822510822No Hit
ACGCCATGGAGGCCGCCCGACACCTTGTACGAGTTGTCGTCGAACTTACC40.10822510822510822No Hit
ACGCCATGGAGGCCGCCGGAGACCTTGTAGGAGTTCTGGTCGAACTTACC40.10822510822510822No Hit
ACGCCGTGGAGGCCGCCCGACACCTTGTACGAGTTGTCGTCGAACTTACC40.10822510822510822No Hit
ACTCCGTGGAGGCCGCCTGACACCTTGTACGAGTTGTCGTCGAACTTACC40.10822510822510822No Hit
ACTCCGTGGAGGCCGCCCGACACCTTGTACGAGTTGTCGTCGAACTTACC40.10822510822510822No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)