FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_GyrBDve245.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_GyrBDve245.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3895
Sequences flagged as poor quality0
Sequence length301
%GC68

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCGTGGAGGCCGCCGGACACCTTGTACGAGTTGTCGTCGAACTTACC70.1797175866495507No Hit
ACGCCATGCAGGCCGCCGGACACCTTGTACGAGTTGTCGTCGAACTTACC60.1540436456996149No Hit
ACGCCGTGTAGGCCGCCGGACACCTTGTACGAGTTGTCGTCGAACTTACC60.1540436456996149No Hit
ACGCCATGGAGGCCGCCGGACACCTTGTACGAGTTGTCGTCGAACTTACC60.1540436456996149No Hit
ACGCCGTGGAGGCCGCCTGACACCTTGTACGAGTTGTCGTCGAACTTACC60.1540436456996149No Hit
ACGCCGTGGAGGCCGCCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC60.1540436456996149No Hit
ACGCCGTGAAGGCCGCCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC50.12836970474967907No Hit
ACTCCGTGTAGGCCGCCGGACACCTTGTACGAGTTGTCGTCGAACTTACC40.10269576379974327No Hit
ACCCCGTGGAGGCCGCCGGACACCTTGTACGAGTTGTCGTCGAACTTACC40.10269576379974327No Hit
ACGCCGTGCAGGCCGCCGGACACCTTGTACGAGTTGTCGTCGAACTTACC40.10269576379974327No Hit
ACGCCGTGGAGGCCGCCAGACACCTTGTACGAGTTGTCGTCGAACTTACC40.10269576379974327No Hit
ACCCCATGGAGGCCGCCGGACACCTTGTACGAGTTGTCGTCGAACTTACC40.10269576379974327No Hit
ACGCCGTGAAGGCCTCCGGACACCTTGTACGAGTTGTCGTCGAACTTACC40.10269576379974327No Hit
ACACCATGGAGGCCGCCTGACACCTTGTACGAGTTGTCGTCGAACTTACC40.10269576379974327No Hit
ACCCCGTGTAGGCCGCCCGACACCTTGTACGAGTTGTCGTCGAACTTACC40.10269576379974327No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)