FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_GyrBDve240.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_GyrBDve240.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5141
Sequences flagged as poor quality0
Sequence length301
%GC71

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC170.33067496595992996No Hit
ACGCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC150.2917720287881735No Hit
ACGCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC150.2917720287881735No Hit
ACGCCATGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.21396615444466055No Hit
ACCCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.21396615444466055No Hit
ACGCCGTGTAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.19451468585878234No Hit
ACTCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.19451468585878234No Hit
ACGCCGTGGAAGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.19451468585878234No Hit
ACGCCATGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.17506321727290408No Hit
ACTCCGTGAAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.17506321727290408No Hit
ACGCCGTGCAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.15561174868702587No Hit
ACGCCGTGTAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.13616028010114764No Hit
ACTCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.13616028010114764No Hit
ACACCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.13616028010114764No Hit
ACGCCATGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.13616028010114764No Hit
ACGCCGTGGAGTCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.13616028010114764No Hit
ACTCCATGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.13616028010114764No Hit
ACACCGTGGAGGCCTCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.13616028010114764No Hit
ACGCCATGTAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.13616028010114764No Hit
ACCCCGTGGAGACCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.11670881151526939No Hit
ACTCCGTGTAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.11670881151526939No Hit
ACACCGTGCAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.11670881151526939No Hit
ACTCCGTGAAAGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.11670881151526939No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)