FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_GyrBDve236.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_GyrBDve236.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1976
Sequences flagged as poor quality0
Sequence length301
%GC70

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCGTGGAGTCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC30.15182186234817813No Hit
ACACCATGTAGGCCGCCCGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC20.10121457489878542No Hit
ACGCCGTGTAGGCCGCCTGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC20.10121457489878542No Hit
ACGCCGTGGAGGCCTCCCGAGACCTTGTAGCCGCCGCCGCCGAACTTGCC20.10121457489878542No Hit
ACCCCGTGCAGGCCGCCGGAGACCTTGTAGCCGCCGCCGCCGAACTTGCC20.10121457489878542No Hit
ACACCATGGAGGCCGCCGGACACCGCGTAGGAGTCCGAGTCGAACTTGCC20.10121457489878542No Hit
ACACCATGAAGACCGCCGGACACCTTGTAGCCGCCGCCGCCGAACTTGCC20.10121457489878542No Hit
ACACCGTGGAGTCCGCCGGAGACCTTGTAGCCGCCGCCGCCGAACTTGCC20.10121457489878542No Hit
ACGCCGTGGAGTCCTCCTGACACCTTGTAGGCGTTGTCGTCGGACGTGTT20.10121457489878542No Hit
ACACCGTGCAGGCCACCGGAGACCTTGTAGGAGTTCTGGTCGAACTTACC20.10121457489878542No Hit
ACGCCGTGGAGGCCGCCTGACACCTTGTAGCCGCCGCCGCCGAACTTGCC20.10121457489878542No Hit
ACGCCGTGAAGGCCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT20.10121457489878542No Hit
ACCCCGTGTAGGCCGCCAGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC20.10121457489878542No Hit
ACCCCATGGAATCCGCCTGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC20.10121457489878542No Hit
ACACCGTGTAGGCCTCCCGACACCTTGTAGCTGTTCTGGTTGAACTTGCC20.10121457489878542No Hit
ACGCCGTGGAGGCCGCCCGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC20.10121457489878542No Hit
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA20.10121457489878542No Hit
ACACCATGTAGGCCACCGGAGACGCCGTAGGACTTGCCGTCGAACTTGCC20.10121457489878542No Hit
ACGCCGTGGAGACCGCCTGACACCTTGTAGCCGCCGCCGTCGCCGAACTT20.10121457489878542No Hit
ACGCCGTGGAGGCCGCCGGACACCTTGTAGCCGCCGCCACCGAACTTGCC20.10121457489878542No Hit
ACACCGTGGAGGCCGCCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC20.10121457489878542No Hit
ACGCCGTGTAAGCCGCCGGAGACCTTGTAGGAGTTCTGGTCGAACTTACC20.10121457489878542No Hit
ACGCCGTGGAGTCCGCCGGACACCTTGTAGCTGTTCTGGTTGAACTTGCC20.10121457489878542No Hit
ACTCCGTGGAGGCCGCCGGAGACGCCGTAGGACTTGCCGTCGAACTTGCC20.10121457489878542No Hit
ACTCCGTGGAGTCCGCCCGACGCCCCGTAGGAGCCGCCACCGAACTTGCC20.10121457489878542No Hit
ACTCCGTGAAGGCCGCCGGAGACGCCGTAGGACTTGCCGTCGAACTTGCC20.10121457489878542No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)