FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_GyrBDve223.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_GyrBDve223.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4587
Sequences flagged as poor quality0
Sequence length301
%GC71

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.2398081534772182No Hit
ACGCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.17440592980161324No Hit
ACTCCGTGCAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.1526051885764116No Hit
ACGCCGTGGAGGCCGCCGGACACCGCGTAGGAGTCGGAGTCGAACTTGCC70.1526051885764116No Hit
ACGCCGTGGAAGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.13080444735120994No Hit
ACACCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.10900370612600828No Hit
ACACCGTGGAGGCCGCCCGACACCGCGTAGGAGTCGGAGTCGAACTTGCC50.10900370612600828No Hit
ACGCCATGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.10900370612600828No Hit
ACGCCGTGGAGACCTCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.10900370612600828No Hit
ACTCCATGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.10900370612600828No Hit
ACGCCATGGAGGCCGCCAGACACCGCGTAGGAGTCGGAGTCGAACTTGCC50.10900370612600828No Hit
ACCCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.10900370612600828No Hit
ACTCCATGGAGGCCGCCAGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.10900370612600828No Hit
ACGCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.10900370612600828No Hit
ACGCCGTGAAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.10900370612600828No Hit
ACACCGTGGAGGCCGCCTGACACCGCGTAGGAGTCGGAGTCGAACTTGCC50.10900370612600828No Hit
ACCCCGTGGAGGCCGCCCGACACCGCGTAGGAGTCGGAGTCGAACTTGCC50.10900370612600828No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)