FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_GyrBDve220.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_GyrBDve220.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2586
Sequences flagged as poor quality0
Sequence length301
%GC72

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCGTGGAGTCCGCCGGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC60.23201856148491878No Hit
ACGCCGTGGAGGCCGCCAGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC60.23201856148491878No Hit
ACTCCGTGGAGGCCGCCTGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC60.23201856148491878No Hit
ACTCCGTGTAGGCCGCCTGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC60.23201856148491878No Hit
ACTCCGTGTAGGCCGCCGGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC40.15467904098994587No Hit
ACGCCATGGAGGCCGCCAGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC40.15467904098994587No Hit
ACTCCGTGCAGGCCGCCTGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC40.15467904098994587No Hit
ACGCCGTGAAGGCCGCCCGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC40.15467904098994587No Hit
ACGCCGTGCAAGCCGCCAGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC30.11600928074245939No Hit
ACTCCATGGAGGCCGCCGGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC30.11600928074245939No Hit
ACGCCGTGTAGGCCGCCTGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC30.11600928074245939No Hit
ACGCCATGGAGGCCGCCCGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC30.11600928074245939No Hit
ACGCCGTGGAGGCCGCCTGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC30.11600928074245939No Hit
ACACCATGGAGGCCGCCTGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC30.11600928074245939No Hit
ACGCCGTGAAGTCCGCCTGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC30.11600928074245939No Hit
ACGCCGTGTAGGCCGCCAGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC30.11600928074245939No Hit
ACGCCATGAAAGCCGCCTGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC30.11600928074245939No Hit
ACACCGTGTAGGCCGCCGGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC30.11600928074245939No Hit
ACTCCATGGAAACCGCCTGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC30.11600928074245939No Hit
ACGCCATGGAGGCCGCCGGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC30.11600928074245939No Hit
ACACCGTGTAGGCCACCTGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC30.11600928074245939No Hit
ACACCATGGAAGCCGCCGGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC30.11600928074245939No Hit
ACACCGTGTAAGCCGCCGGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC30.11600928074245939No Hit
ACGCCGTGCAGGCCGCCGGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC30.11600928074245939No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)