FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_GyrBDve202.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_GyrBDve202.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5362
Sequences flagged as poor quality0
Sequence length301
%GC70

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.20514733308466987No Hit
ACGCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.18649757553151808No Hit
ACGCCGTGGAAGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.13054830287206268No Hit
ACTCCGTGAAGTCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.11189854531891084No Hit
ACGCCGTGGAGGCCGCCCGACACCTTGTAGGCATTGTCGTCCGATGTGTT60.11189854531891084No Hit
ACGCCGTGGAGACCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.11189854531891084No Hit
ACGCCGTGGAAGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.11189854531891084No Hit
ACTCCATGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.11189854531891084No Hit
ACACCGTGAAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.11189854531891084No Hit
ACACCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.11189854531891084No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)