FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_GyrBDve196.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_GyrBDve196.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1864
Sequences flagged as poor quality0
Sequence length301
%GC69

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCGTGGAAGCCGCCCGAGACCTTGTAGCCGCCGCCGCCGAACTTGCC30.1609442060085837No Hit
ACCCCGTGTAGGCCGCCTGAGACCTTGTAGCCGCCGCCGTCGCCGAACTT20.1072961373390558No Hit
ACGCCGTGAAGGCCGCCAGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC20.1072961373390558No Hit
ACGCCGTGGAGGCCACCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC20.1072961373390558No Hit
ACGCCATGAAGGCCTCCCGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC20.1072961373390558No Hit
ACTCCGTGGAGTCCTCCGGAGACCTTGTAGCCGCCGCCGCCGAACTTGCC20.1072961373390558No Hit
TGAGTAACCGCAACATCGTGAAAACACAGTTATCCATACTAGTTAGAGAA20.1072961373390558No Hit
ACACCATGCAAGCCGCCGGATGCCGCATACGACCCCGAGCCGAACTTGCC20.1072961373390558No Hit
ACCCCATGGAGGCCGCCCGAGGTCTCATAGACCTTGCTGTCGAACTTGCC20.1072961373390558No Hit
ACGCCATGGAGACCGCCCGACACCTTGTAGGCGTTGTCGTCGCTGGTATT20.1072961373390558No Hit
ACGCCGTGGAGGCCGCCCGAGACCTTGTACGCGTTGTCGTCGCTGGTGTT20.1072961373390558No Hit
ACGCCGTGTAGGCCGCCGGAGACGCCGTAGGACTTGCCGTCGAACTTGCC20.1072961373390558No Hit
ACGCCGTGGAGACCGCCCGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC20.1072961373390558No Hit
ACGCCGTGTAATCCGCCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC20.1072961373390558No Hit
ACGCCGTGGAGGCCGCCGGACACCTTGTAGGCGTTGTCGTCGGACGTGTT20.1072961373390558No Hit
ACGCCATGTAGGCCGCCGGAGACCTTGTAGGAGTTCTGGTCGAACTTACC20.1072961373390558No Hit
ACTCCGTGCAGGCCGCCGGAGACCTTGTAGGAATTCTGGTCGAACTTACC20.1072961373390558No Hit
ACGCCATGGAGGCCGCCGGAGACCTTGTAGGAGTTCTGGTCGAACTTACC20.1072961373390558No Hit
ACGCCGTGCAAGCCGCCGGAGACCTTGTAGGAGTTCTGGTCGAACTTACC20.1072961373390558No Hit
ACGCCGTGTAGGCCGCCTGACACCTTGTAGGCGTTGTCGTCGGACGTGTT20.1072961373390558No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)