FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_GyrBChi98.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_GyrBChi98.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4870
Sequences flagged as poor quality0
Sequence length301
%GC71

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.18480492813141683No Hit
ACGCCATGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.16427104722792607No Hit
ACTCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.16427104722792607No Hit
ACGCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.16427104722792607No Hit
ACTCCATGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.1437371663244353No Hit
ACTCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.12320328542094457No Hit
ACTCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.12320328542094457No Hit
ACGCCGTGGAGACCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.12320328542094457No Hit
ACCCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.12320328542094457No Hit
ACGCCATGGAGACCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.12320328542094457No Hit
ACGCCGTGAAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.12320328542094457No Hit
ACGCCGTGGAGGCCACCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.12320328542094457No Hit
ACTCCGTGGAGACCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.10266940451745381No Hit
ACACCGTGTAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.10266940451745381No Hit
ACGCCGTGTAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.10266940451745381No Hit
ACACCGTGTAAGCCTCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.10266940451745381No Hit
ACACCGTGGAAGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.10266940451745381No Hit
ACGCCATGGAGGCCGCCAGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.10266940451745381No Hit
ACGCCGTGGAAGCCGCCAGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.10266940451745381No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)