FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_GyrBChi188.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_GyrBChi188.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6746
Sequences flagged as poor quality0
Sequence length301
%GC71

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC230.3409427809072043No Hit
ACTCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC170.25200118588793363No Hit
ACGCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC170.25200118588793363No Hit
ACGCCGTGTAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC140.20753038837829826No Hit
ACTCCATGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC140.20753038837829826No Hit
ACTCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC130.19270678920841983No Hit
ACTCCGTGGAGGCCTCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC130.19270678920841983No Hit
ACGCCATGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC120.17788319003854136No Hit
ACGCCGTGAAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC120.17788319003854136No Hit
ACGCCGTGCAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.1630595908686629No Hit
ACACCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.1630595908686629No Hit
ACTCCGTGAAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.1630595908686629No Hit
ACCCCGTGAAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.1630595908686629No Hit
ACTCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.14823599169878449No Hit
ACGCCGTGTAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.14823599169878449No Hit
ACGCCATGGAGGCCTCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.14823599169878449No Hit
ACGCCGTGGAGTCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.14823599169878449No Hit
ACGCCGTGCAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.13341239252890602No Hit
ACGCCATGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.13341239252890602No Hit
ACGCCGTGAAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.13341239252890602No Hit
ACGCCATGTAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.13341239252890602No Hit
ACGCCGTGTAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.13341239252890602No Hit
ACGCCGTGGAGGCCACCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.13341239252890602No Hit
ACGCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.13341239252890602No Hit
ACTCCGTGAAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.13341239252890602No Hit
ACGCCGTGAAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.13341239252890602No Hit
ACTCCGTGGAGGCCACCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11858879335902757No Hit
ACCCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11858879335902757No Hit
ACGCCGTGGAAGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11858879335902757No Hit
ACTCCGTGTAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11858879335902757No Hit
ACCCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11858879335902757No Hit
ACGCCATGGAGGCCGCCAGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11858879335902757No Hit
ACACCGTGGAGGCCTCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11858879335902757No Hit
ACACCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11858879335902757No Hit
ACGCCGTGGAGGCCGCCGGACACGGCGTAGGCGCCGCCGCCGAACTTGCC80.11858879335902757No Hit
ACGCCGTGGAGACCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10376519418914913No Hit
ACCCCGTGAAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10376519418914913No Hit
ACACCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10376519418914913No Hit
ACTCCATGCAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10376519418914913No Hit
ACCCCGTGTAGGCCTCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10376519418914913No Hit
ACGCCGTGGAGGCCTCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10376519418914913No Hit
ACGCCGTGGAATCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10376519418914913No Hit
ACACCATGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10376519418914913No Hit
ACACCATGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10376519418914913No Hit
ACTCCGTGGAGTCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10376519418914913No Hit
ACGCCGTGCAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10376519418914913No Hit
ACGCCGTGGAAGCCTCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10376519418914913No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)