FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_GyrBChi187.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_GyrBChi187.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7050
Sequences flagged as poor quality0
Sequence length301
%GC71

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC190.2695035460992908No Hit
ACGCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC190.2695035460992908No Hit
ACGCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC190.2695035460992908No Hit
ACTCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC160.22695035460992907No Hit
ACGCCGTGTAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC140.19858156028368795No Hit
ACGCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC130.18439716312056736No Hit
ACTCCGTGTAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC120.1702127659574468No Hit
ACACCGTGTAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.15602836879432624No Hit
ACTCCATGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.15602836879432624No Hit
ACGCCGTGAAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.15602836879432624No Hit
ACGCCGTGGAGACCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.14184397163120568No Hit
ACGCCATGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.14184397163120568No Hit
ACTCCGTGGAGGCCACCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.14184397163120568No Hit
ACGCCGTGGAGGCCGCCAGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.14184397163120568No Hit
ACTCCGTGAAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.14184397163120568No Hit
ACGCCGTGTAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.1276595744680851No Hit
ACGCCATGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.1276595744680851No Hit
ACGCCGTGGAAGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.1276595744680851No Hit
ACTCCATGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.1276595744680851No Hit
ACCCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.1276595744680851No Hit
ACGCCGTGGAGGCCTCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.1276595744680851No Hit
ACTCCGTGTAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.1276595744680851No Hit
ACCCCATGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.1276595744680851No Hit
ACCCCGTGCAAGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11347517730496454No Hit
ACACCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11347517730496454No Hit
ACTCCGTGGAGACCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11347517730496454No Hit
ACTCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11347517730496454No Hit
ACGCCGTGTAGACCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11347517730496454No Hit
ACGCCATGGAGGCCACCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11347517730496454No Hit
ACGCCGTGGAGGCCGCCCGACACGGCGTAGGCGCCGCCGCCGAACTTGCC80.11347517730496454No Hit
ACTCCGTGAAGTCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11347517730496454No Hit
ACACCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11347517730496454No Hit
ACGCCGTGGAGGCCACCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11347517730496454No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)