FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_GyrBChi186.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_GyrBChi186.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5100
Sequences flagged as poor quality0
Sequence length301
%GC71

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC160.3137254901960784No Hit
ACGCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC150.29411764705882354No Hit
ACTCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC140.27450980392156865No Hit
ACTCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC130.25490196078431376No Hit
ACACCGTGTAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC130.25490196078431376No Hit
ACGCCGTGGAAGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC130.25490196078431376No Hit
ACGCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC130.25490196078431376No Hit
ACGCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC120.2352941176470588No Hit
ACGCCATGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.2156862745098039No Hit
ACTCCGTGTAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.2156862745098039No Hit
ACTCCATGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.2156862745098039No Hit
ACGCCGTGGAGACCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.19607843137254902No Hit
ACGCCGTGTAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.19607843137254902No Hit
ACCCCGTGGAGTCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.19607843137254902No Hit
ACGCCGTGGAGGCCGCCAGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.19607843137254902No Hit
ACACCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.17647058823529413No Hit
ACACCGTGTAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.17647058823529413No Hit
ACGCCGTGGAGTCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.17647058823529413No Hit
ACTCCGTGGAAGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.17647058823529413No Hit
ACGCCGTGGAGGCCACCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.17647058823529413No Hit
ACGCCGTGAAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.1568627450980392No Hit
ACTCCGTGAAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.1568627450980392No Hit
ACGCCATGTAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.1568627450980392No Hit
ACGCCGTGTAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.1568627450980392No Hit
ACGCCGTGGAAGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.1568627450980392No Hit
ACGCCGTGCAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.1568627450980392No Hit
ACTCCGTGTAGGCCTCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.1568627450980392No Hit
ACGCCATGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.13725490196078433No Hit
ACGCCGTGAAGGCCACCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.13725490196078433No Hit
ACGCCGTGAAGTCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.13725490196078433No Hit
ACGCCATGGAGGCCTCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.13725490196078433No Hit
ACCCCATGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.13725490196078433No Hit
ACGCCATGCAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.13725490196078433No Hit
ACACCATGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.13725490196078433No Hit
ACTCCGTGAAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.13725490196078433No Hit
ACGCCGTGAAGACCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.13725490196078433No Hit
ACGCCATGGAGTCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.1176470588235294No Hit
ACGCCGTGAAATCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.1176470588235294No Hit
ACTCCATGTAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.1176470588235294No Hit
ACACCGTGCAGACCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.1176470588235294No Hit
ACTCCATGGAGGCCACCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.1176470588235294No Hit
ACGCCATGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.1176470588235294No Hit
ACGCCGTGGAAGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.1176470588235294No Hit
ACTCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.1176470588235294No Hit
ACGCCATGGAGGCCACCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.1176470588235294No Hit
ACGCCGTGGAGGCCTCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.1176470588235294No Hit
ACGCCATGCAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.1176470588235294No Hit
ACGCCATGGAAGCCGCCAGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.1176470588235294No Hit
ACGCCATGGAGACCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.1176470588235294No Hit
ACCCCATGAAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.1176470588235294No Hit
ACCCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.1176470588235294No Hit
ACGCCGTGGAGGCCTCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.1176470588235294No Hit
ACTCCGTGTAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.1176470588235294No Hit
ACGCCGTGTAGTCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.1176470588235294No Hit
ACGCCGTGTAGACCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.1176470588235294No Hit
ACACCATGGAGGCCGCCAGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.1176470588235294No Hit
ACTCCGTGAAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.1176470588235294No Hit
ACGCCATGGAGGCCTCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.1176470588235294No Hit
ACACCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.1176470588235294No Hit
ACTCCATGGAGGCCTCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.1176470588235294No Hit
ACTCCGTGGAGGCCACCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.1176470588235294No Hit
ACACCATGAAGGCCACCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.1176470588235294No Hit
ACTCCATGTAAGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.1176470588235294No Hit
ACCCCGTGGAGTCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.1176470588235294No Hit
ACGCCATGTAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.1176470588235294No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)