FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_GyrBChi165.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_GyrBChi165.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1405
Sequences flagged as poor quality0
Sequence length301
%GC73

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTCCATGGAGTCCGCCCGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC20.1423487544483986No Hit
ACTCCGTGGAGTCCGCCTGACACGGCGTAGGCGCCGCCGCCGAACTTGCC20.1423487544483986No Hit
ACACCGTGGAGGCCGCCGGAGACCGCGTAGCCGCCGCCGCCGAACTTGCC20.1423487544483986No Hit
ACGCCGTGCAGGCCGCCAGAGACCTTGTAGCCGCCGTCGCCGAACTTGCC20.1423487544483986No Hit
ACTCCGTGGAAGCCGCCCGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC20.1423487544483986No Hit
ACTCCGTGGAGGCCTCCCGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC20.1423487544483986No Hit
ACTCCATGCAGGCCGCCCGACACCTTGTAGCTGTTCTGGTTGAACTTGCC20.1423487544483986No Hit
ACGCCGTGTAAGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.1423487544483986No Hit
ACTCCGTGGAGACCGCCTGAGACCGCGTAGCCGCCGCCGCCGAACTTGCC20.1423487544483986No Hit
ACGCCGTGGAGGCCGCCTGACACCTTGTACGAACCCTTGTCGAACTTACC20.1423487544483986No Hit
ACTCCGTGGAGGCCACCCGAGACCGCGTACGACTTGTCGTCGAACTTGCC20.1423487544483986No Hit
ACGCCATGTAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.1423487544483986No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)