FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_GyrBChi120.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_GyrBChi120.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3543
Sequences flagged as poor quality0
Sequence length301
%GC71

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.19757267852102736No Hit
ACGCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.19757267852102736No Hit
ACGCCGTGCAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.1693480101608806No Hit
ACGCCATGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.1693480101608806No Hit
ACTCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.14112334180073383No Hit
ACCCCGTGGAAGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.14112334180073383No Hit
ACGCCATGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.14112334180073383No Hit
ACGCCGTGGAGGCCTCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.14112334180073383No Hit
ACACCATGGAGGCCTCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11289867344058707No Hit
ACGCCGTGCAAGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11289867344058707No Hit
ACACCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11289867344058707No Hit
ACGCCATGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11289867344058707No Hit
ACGCCATGGAAGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11289867344058707No Hit
ACGCCGTGGAAGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11289867344058707No Hit
ACACCGTGAAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11289867344058707No Hit
ACGCCATGGAGGCCACCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11289867344058707No Hit
ACACCGTGCAAGCCGCCAGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11289867344058707No Hit
ACGCCGTGCAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11289867344058707No Hit
ACTCCGTGTAGGCCTCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11289867344058707No Hit
ACGCCGTGTAGACCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11289867344058707No Hit
ACGCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11289867344058707No Hit
ACTCCGTGGAAGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11289867344058707No Hit
ACACCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11289867344058707No Hit
ACTCCGTGGAGGCCACCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11289867344058707No Hit
ACGCCATGGAATCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11289867344058707No Hit
ACGCCGTGGAGGCCTCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11289867344058707No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)