FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_GyrBChi117.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_GyrBChi117.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3029
Sequences flagged as poor quality0
Sequence length301
%GC72

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCATGGAGGCCGCCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC60.19808517662594916No Hit
ACTCCGTGGAGGCCGCCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC50.1650709805216243No Hit
ACTCCGTGTAGGCCGCCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC40.13205678441729946No Hit
ACTCCGTGTAGACCACCCGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC40.13205678441729946No Hit
ACGCCGTGGAAACCGCCCGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC40.13205678441729946No Hit
ACGCCGTGGAGGCCGCCCGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC40.13205678441729946No Hit
ACTCCGTGGAGGCCGCCTGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC40.13205678441729946No Hit
ACTCCATGGAGGCCGCCCGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC40.13205678441729946No Hit
ACGCCGTGGAGGCCGCCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC40.13205678441729946No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)