FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_GyrBATH88.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_GyrBATH88.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44
Sequences flagged as poor quality0
Sequence length301
%GC63

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA49.090909090909092No Hit
ACTCCGTGAAATCCGCCTGAGACCTTGTAGCCGCCGCCGCCGAACTTGCC12.272727272727273No Hit
ACTCCGTGCAGGCCTCCCGAGTGGAGGACGGTCATGACCACCTCCAGCGC12.272727272727273No Hit
ACACCGTGCAAGCCGCCCGAGTGCAGTACGGTCATCACCACTTCCAGCGC12.272727272727273No Hit
ACCCCGTGGAGACCGCCGGAGACCTTGTAACCCGAGCCACCGAACTTTCC12.272727272727273No Hit
ACGCCGTGTAGGCCGCCTGAGACCTTGTAGGAGTTCTGGTCGAACTTACC12.272727272727273No Hit
ACGCCGTGTAAGCCGCCTGAGACCTTGTACGCGTTCCCGTCGTTGATGGT12.272727272727273No Hit
ACGCCGTGGAGTCCACCCGAGACCGCGTAGCCGCCGCCGCCGAACTTGCC12.272727272727273No Hit
ACTCCGTGAAGGCCGCCTGAGGTTTCGTAAGCCTTGGAATCGAATTTGCC12.272727272727273No Hit
TGAGTACCCGCAACATCGTGAAAACACAGTTATCCATACTAGTTAGAGAA12.272727272727273No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGGAAGT12.272727272727273No Hit
ACGCCATGAAATCCGCCTGAGACCTTGTAGCCACTCCCGCCGAACTTGCC12.272727272727273No Hit
ACGCCATGCAGGCCGCCTGACACCGCGTACCCGCCACCACCGAACTTGCC12.272727272727273No Hit
ACGCCGTGGAAACCACCAGAGACCTTGTAGCCGTCGCCGCCGAATTTCCC12.272727272727273No Hit
ACACCGTGAAGGCCGCCCGAGACCTTGTAGGAGTTCTTGTCGAACTTACC12.272727272727273No Hit
ACCCCGTGTAGGCCTCCAGAGACCTTGTAGCTGTTCTGGTCGAATTTCCC12.272727272727273No Hit
ACGCCATGGACTACACCGGACACCGCGTAGCCGCCGCCGCCGAACTTGCC12.272727272727273No Hit
ACGCCATGGAATCCTCCTGAGACCTTGTAGCCGCCGTCCCCGAACTTGCC12.272727272727273No Hit
ACGCCGTGGAAGCCGCCGGAGTGGAGCACCGTGAGGATCACCTCGAGCGC12.272727272727273No Hit
TGAGTAACCGCAACATAGTGACGCTGACTCATCCTGTCTCTTATACACAT12.272727272727273No Hit
ACGCCATGTAAGCCACCGGACACCTTGTAGGAGTTCTGGTCGAACTTACC12.272727272727273No Hit
ACGCCATGTAATCCGCCTGCATGCAGCTTGGTCATGATCACTTCGAGCGT12.272727272727273No Hit
ACCCCATGAAAGCCACCGGAGGCCGCGTAGGAGCCGGAGCCGAACTTGCC12.272727272727273No Hit
ACGCCGTGGAATCCACCGGACACCTTGTAACTGTCGTTGTCGAACTTGCC12.272727272727273No Hit
ACGCCGTGGAGGCCGCCGGAGACCTTGTAGCCGCCACCGCCGAACTTGCC12.272727272727273No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT12.272727272727273No Hit
CGGCTGCGTTCTTCATCGATGCCCGAGCCAAGAGATCCATTGTTGAAAGT12.272727272727273No Hit
ACTCCGTGTAGTCCTCCGGACACCTTGTAGCTGTTGTCGTCGAACTTACC12.272727272727273No Hit
ACACCGTGGAGACCTCCCGATGTTTCATAGGCTTTGCCGGAAAACTTGCC12.272727272727273No Hit
ACACCATGGAAACCGCCGGAGACCTTGTAGCCCTTGCCCTCGAACTTGCC12.272727272727273No Hit
ACACCGTGAAATCCACCAGAAACCTTGTAGGCGTTGGTGTCCGACGTATT12.272727272727273No Hit
ACTCCGTGGAGGCCTCCAGAGACCTTGTAGGAGTTCTCGTTGAACTTCCC12.272727272727273No Hit
ACGCCATGTAGGCCGCCGGAGACCGCATACCCGCCGCCGCCGAACTTACC12.272727272727273No Hit
CCGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAG12.272727272727273No Hit
ACACCGTGGAGGCCGCCCGAGTGGAAATAGTTCTTGGCCTCGAACTTCCC12.272727272727273No Hit
ACACCGTGTAAGCCGCCGGACACCTTGTACCCGCCGCCACCGAACTTGCC12.272727272727273No Hit
AGCCGTGTAGTCCGCCAGACACCTTATAGGAATTCTGGTCGAACTTACCG12.272727272727273No Hit
ACGCCGTGCAGACCGCCGGACACCGCGTAGGAGTCCGAGTCGAACTTGCC12.272727272727273No Hit
ATTCCGTGGAGGCCGCCCGAGACCTTGTACGCGTTCTCGTCGTTGGTGTT12.272727272727273No Hit
ACGCCGTGGAGACCGCCGGACGTCTCGTAGACCTTTGAGTCGAACTTGCC12.272727272727273No Hit
ACGCCGTGGAATCCTCCAGAGACCTTGTAACTGTCGTTGTCGAACTTGCC12.272727272727273No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)