FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_GyrBATH873.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_GyrBATH873.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14
Sequences flagged as poor quality0
Sequence length301
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA321.428571428571427No Hit
TGAGTAACCGCACCATAGTGAAAACACCGTTATCCATACTAGTTAGAGAA17.142857142857142No Hit
ACACCGTGAAGGCCGCCAGAGACCTTGTACGAGTTTTGGTCGACCTTGCC17.142857142857142No Hit
TGAGTAACCGCAACATAGTGAACGGCTATTCGACGCTGACTCATCCTGTC17.142857142857142No Hit
CGACTAACCGCATCATGTTTGACGCTGACTCAACATGCCTCTTATACACT17.142857142857142No Hit
ACTCCGTGGAAGCCTCCAGACACCTTGTAGCTGTTCTGGTTGAACTTGCC17.142857142857142No Hit
TGAGTACCCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA17.142857142857142No Hit
CGGCTGCGTTCTTCACCGATGCAAGAGTCAAGAGATCCGTTGTTAAAAGT17.142857142857142No Hit
TGAGTAACCGCAACATCGTGAAAACACAGTTATCCATACTAGTTAGAGAA17.142857142857142No Hit
TGAGTAACCGCTACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA17.142857142857142No Hit
ACACCATGGAGGCCGCCAGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC17.142857142857142No Hit
TGATTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAC17.142857142857142No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)