FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_GyrBATH82.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_GyrBATH82.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1527
Sequences flagged as poor quality0
Sequence length301
%GC71

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTCCATGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC30.19646365422396855No Hit
ACTCCGTGGAGGCCGCCCGAGACCTTGTAGCCGCCGCCGCCGAACTTGCC30.19646365422396855No Hit
ACGCCGTGGAGTCCGCCTGACACCTTGTAGGCGTTGTCGTCGGACGTGTT20.13097576948264572No Hit
ACGCCGTGAAGGCCACCTGAGACGCCGTAGGACTTGCCGTCGAACTTGCC20.13097576948264572No Hit
ACGCCATGGAGGCCTCCCGACACGGCGTAGGCGCCGCCGCCGAACTTGCC20.13097576948264572No Hit
ACTCCATGGAAGCCGCCCGCGTGCAGCTTGGTGAAGACGACCTCGACGCC20.13097576948264572No Hit
ACTCCATGTAAGCCACCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.13097576948264572No Hit
ACTCCGTGTAAGCCGCCTGAGACCTTATAGCCGGAGCCGTCGAACTTGCC20.13097576948264572No Hit
ACTCCGTGGAAGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.13097576948264572No Hit
ACCCCGTGGAGTCCGCCTGACGCCGCGTAGGAGCCGGAGCCGAACTTGCC20.13097576948264572No Hit
ACGCCATGGAGGCCGCCAGACGCCGCGTAGGAGCCGGAGCCGAACTTGCC20.13097576948264572No Hit
ACTCCGTGGAGACCGCCAGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.13097576948264572No Hit
ACTCCGTGCAGGCCTCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.13097576948264572No Hit
ACACCGTGAAGACCGCCGGAGACGCCGTAGGACTTGCCGTCGAACTTGCC20.13097576948264572No Hit
ACCCCGTGGAGGCCGCCTGAGACGCCGTAGGACTTGCCGTCGAACTTGCC20.13097576948264572No Hit
ACACCATGGAATCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.13097576948264572No Hit
ACTCCATGAAGGCCACCCGAGACCTTGTAGCCGCCGCCGTCGCCGAACTT20.13097576948264572No Hit
ACTCCGTGTAGGCCGCCCGACGCCGCGTAGGAGCCGGAGCCGAACTTGCC20.13097576948264572No Hit
ACTCCATGGAGGCCTCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.13097576948264572No Hit
ACTCCATGGAGGCCTCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.13097576948264572No Hit
ACACCGTGGAAGCCACCAGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.13097576948264572No Hit
ACTCCGTGAAAGCCGCCGGAGACGCCGTAGCTCTTGCCGTCGAACTTCCC20.13097576948264572No Hit
ACGCCATGGAGGCCGCCTGACGCCGCGTAGGAGCCGGAGCCGAACTTGCC20.13097576948264572No Hit
ACCCCGTGCAGGCCACCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.13097576948264572No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)