FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_GyrBATH71.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_GyrBATH71.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1316
Sequences flagged as poor quality0
Sequence length301
%GC70

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA80.60790273556231No Hit
ACTCCGTGGAAGCCGCCTGACACCTTGTAGCCGCCGCCGCCGAACTTGCC30.22796352583586624No Hit
ACGCCATGCAGGCCGCCCGAGACCGCGTAGCCGCCGCCGCCGAACTTGCC20.1519756838905775No Hit
ACGCCGTGGAGGCCGCCGGAGGTTTCGTAAGCCTTGGAATCGAATTTGCC20.1519756838905775No Hit
ACGCCGTGGAGGCCGCCGGAGACCTTGTAGCCGCCACCACCGAACTTGCC20.1519756838905775No Hit
ACGCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.1519756838905775No Hit
TGAGTAACCGCAACATCGTGAAAACACAGTTATCCATACTAGTTAGAGAA20.1519756838905775No Hit
ACCCCGTGCAGACCGCCGGAGACCTTGTAGCCGCCACCACCGAACTTGCC20.1519756838905775No Hit
ACGCCATGTAGGCCACCGGACACCGCGTAGGAGTCCGAGTCGAACTTGCC20.1519756838905775No Hit
ACGCCGTGGAAGCCGCCCGACACCGCGTATGCTCCCCCGCCGAACTTGCC20.1519756838905775No Hit
ACTCCGTGGAGTCCGCCTGAGACCTTGTAGCCGCCACCACCGAACTTGCC20.1519756838905775No Hit
ACGCCGTGGAAGCCGCCTGAGACCTTGTAGCCGCCGCCGCCGAACTTGCC20.1519756838905775No Hit
ACGCCGTGTAGGCCGCCGGACGCCGCGTAGGAGCCGGAGCCGAACTTGCC20.1519756838905775No Hit
ACTCCGTGGAGGCCGCCGGACACCGCGTATGCTCCCCCGCCGAACTTGCC20.1519756838905775No Hit
ACGCCATGCAGGCCGCCTGAGACCTTGTAGGAGTTCTGGTCGAACTTACC20.1519756838905775No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)