FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_GyrBATH65.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_GyrBATH65.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1576
Sequences flagged as poor quality0
Sequence length301
%GC69

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA50.31725888324873097No Hit
ACGCCGTGAAGTCCGCCCGAGACCTTGTAGGAGTTCTGGTCGAACTTACC20.12690355329949238No Hit
ACTCCATGGAGGCCGCCGGACGCCGCGTAGGAGCCGGAACCGAACTTGCC20.12690355329949238No Hit
ACACCGTGTAGGCCGCCGGACACCTTGTACGTGTCGCTGTTGAATTTGCC20.12690355329949238No Hit
ACACCGTGGAGGCCGCCGGAGACCTTGTAGGAGTTCTGGTCGAACTTACC20.12690355329949238No Hit
ACGCCATGGAGGCCGCCCGACGCCGCGTAGGAGCCGGAACCGAACTTGCC20.12690355329949238No Hit
ACTCCGTGTAGGCCGCCGGACGCCGCGTAGGAGCCGGAACCGAACTTGCC20.12690355329949238No Hit
TGAGTAACCGCAACATCGTGAAAACACAGTTATCCATACTAGTTAGAGAA20.12690355329949238No Hit
ACGCCATGAAGTCCGCCAGACACCTTGTACGTGTCGCTGTTGAATTTGCC20.12690355329949238No Hit
ACACCATGGAAGCCGCCTGACGCCGCGTAGGAGCCGGAACCGAACTTGCC20.12690355329949238No Hit
ACTCCGTGGAAGCCGCCTGAGGTCTCGTAGACCTTGCTGTCGAACTTGCC20.12690355329949238No Hit
ACGCCGTGGAGGCCGCCGGAGACCTTGTAGCCGCCGCCGCCGAACTTGCC20.12690355329949238No Hit
ACTCCGTGAAGTCCGCCTGACACCTTGTACGTGTCGCTGTTGAATTTGCC20.12690355329949238No Hit
ACGCCGTGTAGGCCGCCTGACACCTTGTACGTGTCGCTGTTGAATTTGCC20.12690355329949238No Hit
ACACCGTGTAAGCCACCGGACACCTTGTACGTGTCGCTGTTGAATTTGCC20.12690355329949238No Hit
ACGCCGTGTAAGCCGCCGGACACCTTGTAGCCGCCGCCGCCGAACTTGCC20.12690355329949238No Hit
ACTCCGTGGAGGCCGCCGGACGCCGCGTAGGAGCCGGAACCGAACTTGCC20.12690355329949238No Hit
ACGCCGTGGAAGCCGCCGGACACCGCGTAGGAGTCCGAGTCGAACTTGCC20.12690355329949238No Hit
ACGCCGTGCAGGCCACCTGACACCTTGTACGTGTCGCTGTTGAATTTGCC20.12690355329949238No Hit
ACACCATGCAAGCCGCCCGACACCTTGTACGTGTCGCTGTTGAATTTGCC20.12690355329949238No Hit
ACGCCGTGGAAGCCGCCGGAGACCTTGTAGGAGTTCTGGTCGAACTTACC20.12690355329949238No Hit
ACACCGTGTAGGCCGCCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC20.12690355329949238No Hit
ACACCATGGAAGCCTCCTGAGGTCTCGTAGACCTTGCTGTCGAACTTGCC20.12690355329949238No Hit
ACGCCGTGGAGTCCACCGGAGACCTTGTAGCCGCTGCCGTCACCGAACTT20.12690355329949238No Hit
ACTCCGTGAAGGCCGCCGGAGACCTTGTAGGAGTTCTGGTCGAACTTACC20.12690355329949238No Hit
ACGCCATGAAAACCGCCGGACACCTTGTACGTGTCGCTGTTGAATTTGCC20.12690355329949238No Hit
ACGCCGTGGAGGCCGCCGGAGACGCCGTAGCTCTTGCCGTCGAACTTCCC20.12690355329949238No Hit
ACGCCGTGTAGGCCGCCGGACACCTTGTACGTGTCGCCGTTGAATTTGCC20.12690355329949238No Hit
ACTCCATGGAATCCGCCGGAGACCTTGTAGGAGTTCTGGTCGAACTTACC20.12690355329949238No Hit
ACGCCGTGGAGTCCGCCAGAGGTCTCATAGGCCTTGCCCGAGAACTTGCC20.12690355329949238No Hit
ACACCATGTAAGCCGCCGGAGACGCCGTAGGACTTGCCGTCGAACTTGCC20.12690355329949238No Hit
ACGCCATGAAGTCCGCCGGAGACGCCGTAGGACTTGCCGTCGAACTTGCC20.12690355329949238No Hit
ACTCCGTGGAAGCCGCCGGACACCTTGTACGTGTCGCTGTTGAATTTGCC20.12690355329949238No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)