FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_GyrBATH49.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_GyrBATH49.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1824
Sequences flagged as poor quality0
Sequence length301
%GC68

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTCCATGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.21929824561403508No Hit
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA40.21929824561403508No Hit
ACGCCGTGTAGGCCGCCGGCGTGCAGTTTCGTGAAGACGACCTCGACGCC40.21929824561403508No Hit
ACGCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.21929824561403508No Hit
ACTCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC30.1644736842105263No Hit
ACGCCATGTAAGCCTCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC30.1644736842105263No Hit
ACGCCATGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC30.1644736842105263No Hit
ACACCGTGTAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.10964912280701754No Hit
ACGCCGTGCAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.10964912280701754No Hit
ACTCCGTGGAGACCGCCGGACACGGCGTAGGCGCCGCCGCCGAACTTGCC20.10964912280701754No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT20.10964912280701754No Hit
ACCCCGTGTAGGCCGCCTGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC20.10964912280701754No Hit
ACTCCGTGAAGACCGCCTGAGACCTTGTAGGAGTTCTGGTCGAACTTACC20.10964912280701754No Hit
ACTCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.10964912280701754No Hit
ACGCCGTGGAGGCCTCCCGACACCGCGTAGGAGTCCGAGTCGAACTTGCC20.10964912280701754No Hit
ACGCCATGGAATCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.10964912280701754No Hit
ACGCCGTGCAGGCCACCCGACACGGCGTAGGCGCCGCCGCCGAACTTGCC20.10964912280701754No Hit
ACACCGTGGAGGCCTCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.10964912280701754No Hit
ACACCGTGGAGGCCTCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.10964912280701754No Hit
ACACCGTGTAGGCCGCCGGCGTGCAGGATCGTGAGCACGACCTCGACCGT20.10964912280701754No Hit
ACGCCATGTAAACCGCCGGCGTGGAGCTGGGTCATGATGACCTCGGCCGC20.10964912280701754No Hit
ACTCCGTGGAGGCCGCCCGACACCGCGTAGGAGTCCGAGTCGAACTTGCC20.10964912280701754No Hit
ACTCCATGCAGGCCGCCGGAGACCTTGTAGGAGTTCTGGTCGAACTTACC20.10964912280701754No Hit
ACACCGTGCAAGCCACCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.10964912280701754No Hit
ACGCCGTGGAGGCCTCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.10964912280701754No Hit
ACACCGTGAAAGCCGCCGGCGTGCAGTTTCGTGAAGACGACCTCGACGCC20.10964912280701754No Hit
ACGCCATGTAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.10964912280701754No Hit
ACGCCGTGTAAACCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.10964912280701754No Hit
ACGCCGTGCAGTCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.10964912280701754No Hit
ACGCCGTGAAGGCCGCCGGACACCTTGTAGCCGCCGCCGCCGAACTTGCC20.10964912280701754No Hit
ACACCGTGTAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.10964912280701754No Hit
ACACCATGTAATCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.10964912280701754No Hit
ACGCCATGGAGACCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.10964912280701754No Hit
ACGCCGTGAAGTCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.10964912280701754No Hit
ACGCCATGGAGGCCGCCGGACACCTTGTAGCTGTTCTGGTTGAACTTCCC20.10964912280701754No Hit
ACGCCGTGGAATCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.10964912280701754No Hit
ACTCCATGGAGTCCGCCAGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.10964912280701754No Hit
ACCCCGTGAAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.10964912280701754No Hit
ACTCCGTGGAGGCCACCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.10964912280701754No Hit
ACCCCGTGTAAGCCGCCGGCGTGCAGTTTCGTGAAGACGACCTCGACGCC20.10964912280701754No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)