FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_GyrBATH45.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_GyrBATH45.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1014
Sequences flagged as poor quality0
Sequence length301
%GC68

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCGTGGAGGCCGCCGGACACCTTGTACGTGTCGCTGTTGAATTTGCC50.4930966469428008No Hit
ACGCCGTGCAGGCCGCCTGACACCTTGTACGTGTCGCTGTTGAATTTGCC40.39447731755424065No Hit
ACCCCGTGTAGTCCTCCGGAGACCTTGTAGGAATTCTGGTCGAACTTGCC20.19723865877712032No Hit
ACACCGTGTAGGCCGCCGGACACCTTGTACGTGTCGCTGTTGAATTTGCC20.19723865877712032No Hit
ACGCCGTGTAAGCCTCCTGACACCTTGTACGTGTCGCTGTTGAATTTGCC20.19723865877712032No Hit
ACACCATGTAGGCCGCCTGACACCTTGTACGTGTCGCTGTTGAATTTGCC20.19723865877712032No Hit
ACCCCATGTAATCCGCCCGAGACCTTGTAGGAGTTCTGGTCGAACTTACC20.19723865877712032No Hit
ACTCCATGGAAGCCGCCGGACACCTTGTACGTGTCGCTGTTGAATTTGCC20.19723865877712032No Hit
ACACCGTGTAGGCCGCCGGAGACCTTGTAGGAGTTCTGGTCGAACTTACC20.19723865877712032No Hit
ACTCCGTGGAGGCCGCCGGACACCTTGTACGTGTCGCTGTTGAATTTGCC20.19723865877712032No Hit
ACGCCGTGGAGACCTCCCGACGTCTCGTAGACCTTCGAATCGAACTTTCC20.19723865877712032No Hit
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA20.19723865877712032No Hit
ACACCGTGAAGTCCACCTGAGACCTTGTAGGAGTTCTGGTCGAACTTACC20.19723865877712032No Hit
ACTCCGTGCAGGCCGCCAGACACCTTGTACGTGTCGCTGTTGAATTTGCC20.19723865877712032No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)