FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_GyrBATH30.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_GyrBATH30.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1187
Sequences flagged as poor quality0
Sequence length301
%GC70

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA40.33698399326032014No Hit
ACCCCGTGAAAGCCGCCCGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC20.16849199663016007No Hit
ACACCGTGGAAGCCGCCTGATGTCTCGTAAGCCTTTCCATCGAACTTGCC20.16849199663016007No Hit
ACGCCATGGAGGCCTCCGGAGACCGCGTACCCGCCGCCGCCGAACTTGCC20.16849199663016007No Hit
ACGCCATGGAGGCCGCCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC20.16849199663016007No Hit
ACGCCATGTAGGCCTCCTGACGCCGCATAGGAGCCGGAGCCGAACTTGCC20.16849199663016007No Hit
ACGCCATGTAAGCCGCCAGAGACCTTGTAGGAGTTCTGGTCGAACTTACC20.16849199663016007No Hit
ACTCCATGTAGGCCGCCTGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC20.16849199663016007No Hit
ACGCCATGTAGTCCGCCGGACACCGCGTAGGAGTCCGAGTCGAACTTGCC20.16849199663016007No Hit
ACGCCGTGGAGTCCACCGGACACCGCGTAGGAGTCCGAGTCGAACTTGCC20.16849199663016007No Hit
ACCCCGTGGAGACCACCGGACACCTTGTAGCCGCCGCCGCCGAACTTGCC20.16849199663016007No Hit
ACGCCGTGGAGGCCGCCGGAGACCGCGTAGCCGCCGCCGCCGAACTTGCC20.16849199663016007No Hit
ACACCGTGGAGGCCGCCTGAGACCTTGTAGCCGCCGCCGCCGAACTTGCC20.16849199663016007No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)