FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_GyrBATH25.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_GyrBATH25.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1546
Sequences flagged as poor quality0
Sequence length301
%GC69

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTCCGTGGAGGCCGCCGGACACCTTGTAGGCATTGTCGTCCGATGTGTT30.19404915912031048No Hit
ACGCCGTGAAAGCCGCCTGAGACCTTGTAGCCGCCGGTGCCGAACTTGCC20.129366106080207No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT20.129366106080207No Hit
ACACCATGGAGGCCGCCGGAGACCTTGTAGGAATTCTGGTCGAACTTACC20.129366106080207No Hit
ACGCCGTGAAGTCCACCGGAGACCTTGTAGCCGCCGGTGCCGAACTTGCC20.129366106080207No Hit
ACCCCGTGCAAGCCACCGGACACCTTGTAGGCATTGTCGTCCGATGTGTT20.129366106080207No Hit
ACGCCATGGAGGCCGCCCGAGACCTTGTAGCCGCCGGTGCCGAACTTGCC20.129366106080207No Hit
ACTCCATGGAGGCCGCCGGACACCTTGTAGCCGCCGCCGCCGAACTTGCC20.129366106080207No Hit
ACACCGTGTAGGCCGCCAGACACCTTGTAGGCATTGTCGTCCGATGTGTT20.129366106080207No Hit
ACGCCATGTAGGCCGCCCGAGTGCAGCACGGTCATGACGACTTCGAGCGC20.129366106080207No Hit
ACTCCGTGTAGGCCGCCGGAGACCTTGTAGGAGTTCTGGTCGAATTTCCC20.129366106080207No Hit
ACTCCGTGGAGACCGCCGGAGACCGCGTAGCCGCCGCCGCCGAACTTGCC20.129366106080207No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)