FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_GyrBATH16.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_GyrBATH16.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1184
Sequences flagged as poor quality0
Sequence length301
%GC69

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA80.6756756756756757No Hit
ACGCCATGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC30.2533783783783784No Hit
ACGCCATGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC30.2533783783783784No Hit
ACGCCGTGGAGTCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC30.2533783783783784No Hit
ACGCCGTGAAAGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.16891891891891891No Hit
ACTCCGTGTAGGCCGCCGGCGTGCAGGATCGTGAGCACGACCTCGACCGT20.16891891891891891No Hit
ACGCCGTGCAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.16891891891891891No Hit
ACACCATGGAGACCACCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.16891891891891891No Hit
ACTCCGTGTAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.16891891891891891No Hit
ACACCATGCAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.16891891891891891No Hit
ACTCCGTGGAGACCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.16891891891891891No Hit
ACGCCGTGTAGTCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.16891891891891891No Hit
ACTCCATGCAAGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.16891891891891891No Hit
ACGCCGTGGAGGCCACCTGAGACCTTGTACGCGTTCTCGTCGCTGGTGTT20.16891891891891891No Hit
ACTCCATGTAAGCCTCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.16891891891891891No Hit
ACGCCGTGGAAGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.16891891891891891No Hit
ACTCCATGAAGACCTCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.16891891891891891No Hit
ACTCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.16891891891891891No Hit
ACGCCGTGGAGGCCGCCGGCGTGCAGGATCGTGAGCACGACCTCGACCGT20.16891891891891891No Hit
ACTCCGTGGAGGCCTCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.16891891891891891No Hit
ACCCCGTGCAAGCCGCCGGCGTGCAGTTTCGTGAAGACGACCTCGACGCC20.16891891891891891No Hit
ACTCCGTGAAGGCCACCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.16891891891891891No Hit
ACGCCGTGCAAGCCGCCGGCGTGCAGTTCGGTCATGACGATTTCGGCGGC20.16891891891891891No Hit
ACCCCGTGGAGGCCACCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.16891891891891891No Hit
ACACCGTGGAAGCCGCCGGCGTGCAGTTTCGTGAAGACGACCTCGACGCC20.16891891891891891No Hit
ACACCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.16891891891891891No Hit
ACCCCGTGGAGGCCTCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.16891891891891891No Hit
ACTCCATGTAGGCCGCCGGCGTGCAGTTTCGTGAAGACGACCTCGACGCC20.16891891891891891No Hit
ACACCGTGAAGGCCGCCAGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.16891891891891891No Hit
ACACCATGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.16891891891891891No Hit
ACGCCGTGTAAGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.16891891891891891No Hit
ACGCCGTGAAAGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.16891891891891891No Hit
ACACCGTGTAGTCCACCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.16891891891891891No Hit
ACGCCGTGAAGTCCTCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.16891891891891891No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)