FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITSDve913.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITSDve913.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences199
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG9547.73869346733669No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG5427.1356783919598No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCAGCCGC2814.07035175879397No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGGTCATAACAAGGTTTCCGTAGGTG21.0050251256281406No Hit
TGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCAGCCGC10.5025125628140703No Hit
GGCTTGGTCATTTAAAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG10.5025125628140703No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCCGCATCGATGAAGAACGCAGC10.5025125628140703No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCATCGATGAAGAACGCAGC10.5025125628140703No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCGTCGATGAAGAACGCAGCCGC10.5025125628140703No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAGCAAGGTTTCCGTAGGTG10.5025125628140703No Hit
GGCTTGGTCATTTAGAGGAAGCAACTCGCATCGATGAAGAACGCAGCCGC10.5025125628140703No Hit
GGCTTGTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAG10.5025125628140703No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTCTCCGTAGGTG10.5025125628140703No Hit
GGCTTGGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGT10.5025125628140703No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG10.5025125628140703No Hit
GGGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGT10.5025125628140703No Hit
GGCTTGGTCATTAAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG10.5025125628140703No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTGGGTG10.5025125628140703No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTACGTG10.5025125628140703No Hit
GGCCTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG10.5025125628140703No Hit
GGCTTGGTCATTTAGAGGAAGTAACAGTCATAACAAGGTTTCCGTAGGTG10.5025125628140703No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTTATAACAAGGTTTCCGTAGGTG10.5025125628140703No Hit
GCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCAGCCGCT10.5025125628140703No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTGA10.5025125628140703No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)