FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITSDve890.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITSDve890.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6289
Sequences flagged as poor quality0
Sequence length301
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTG333352.99729686754651No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG154724.59850532676101No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG4767.568770869772619No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG4166.614724121481953No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTTGGTG400.6360311655271109No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGA170.2703132453490221No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTCTCCGTTGGTG150.23851168707266657No Hit
GGATTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTG120.19080934965813326No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGGTCGTAACAAGGTCTCCGTTGGTG120.19080934965813326No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAGGGTCTCCGTTGGTG120.19080934965813326No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGCCTCCGTTGGTG90.14310701224359992No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGCG90.14310701224359992No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGA90.14310701224359992No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGGTCGTAACAAGGTTTCCGTAGGTG80.12720623310542217No Hit
GGCTTGGTCATTTAGAGGAAGTAAGAGTCGTAACAAGGTCTCCGTTGGTG70.1113054539672444No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCCCCGTTGGTG70.1113054539672444No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAGCAAGGTCTCCGTTGGTG70.1113054539672444No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)