FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITSDve882.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITSDve882.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6236
Sequences flagged as poor quality0
Sequence length301
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTG236837.97305965362412No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG224636.01667735728031No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG69811.193072482360487No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG4166.670942912123155No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTTGGTG300.4810776138550353No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGA150.24053880692751764No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTCTCCGTTGGTG130.2084669660038486No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGCCGTAACAAGGTTTCCGTAGGTG100.1603592046183451No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGA100.1603592046183451No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACGAGGTCTCCGTTGGTG90.14432328415651058No Hit
GGATTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTG80.12828736369467605No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGGTCGTAACAAGGTCTCCGTTGGTG80.12828736369467605No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGGTCGTAACAAGGTTTCCGTAGGTG80.12828736369467605No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAGGGTTTCCGTAGGTG80.12828736369467605No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGCCTCCGTTGGTG70.11225144323284157No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCAGTTGGTG70.11225144323284157No Hit
GGCTTGGTCATTTAGAGGAAGTAAGAGTCGTAACAAGGTTTCCGTAGGTG70.11225144323284157No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)