FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITSDve564.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITSDve564.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences710
Sequences flagged as poor quality0
Sequence length301
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG49669.85915492957746No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG527.323943661971831No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG365.070422535211268No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTTGGTG233.2394366197183095No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTG131.8309859154929577No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTATCCGTAGGTG131.8309859154929577No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT81.1267605633802817No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTTCGTAGGTG40.5633802816901409No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGA40.5633802816901409No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGCG30.42253521126760557No Hit
GGCTTGGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGT20.28169014084507044No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAGGGTTTCCGTAGGTG20.28169014084507044No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCATAGGTG20.28169014084507044No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTCCCGTAGGTG20.28169014084507044No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGCCATAACAAGGTTTCCGTAGGTG20.28169014084507044No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGCTTCCGTAGGTG20.28169014084507044No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTA20.28169014084507044No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGCCGTAACAAGGTTTCCGTAGGTG20.28169014084507044No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCGGTAGGTG20.28169014084507044No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTGGGTG20.28169014084507044No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGGTCGTAACAAGGTCTCCGTAGGTG10.14084507042253522No Hit
GGCTTGGTCATTTAGAAGGAAGTAAAAGTCGTAACAAGGTTCCCGTAGGT10.14084507042253522No Hit
GGCTTGGTCATTTAGAGGAAGTGAAAGTCGTAACAAGGTTTCCGTAGGTG10.14084507042253522No Hit
AGTCCTGGCATGTATATCGGGTCGACGGACTCGAAGGGCCTCACGCACCT10.14084507042253522No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGCAGGTG10.14084507042253522No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGGTCGTAACAAGGTTTCCGTAGGTG10.14084507042253522No Hit
AGCTTGGTCATTTAGAGGAAGTAAAGGTCGTAACAAGGTTTCCGTAGGTG10.14084507042253522No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTATCAAGGTCTCCGTAGGTG10.14084507042253522No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGGTCATAACAAGGTTTCCGTAGGTG10.14084507042253522No Hit
GGCTTGGTCATTTAGAGGAAGTAATAGTCGTAACAAGGTTTCCGTTGGTG10.14084507042253522No Hit
GGCTTTTTCATTTATAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG10.14084507042253522No Hit
GGCTTGGTCATTTTAGAGGAAGTAAAAGTCGTAACAAGGTCTTCGTAGGT10.14084507042253522No Hit
GACCTGGTATGTATAACGGCGGCACCGGGGCGGCGGGCTTGCACCATCTC10.14084507042253522No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGCG10.14084507042253522No Hit
GGCTTGGTCATTTAGAGGTAGTAAAAGTCATAACAAGGTTTCCGTAGGTG10.14084507042253522No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTC10.14084507042253522No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCAGCCGC10.14084507042253522No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTA10.14084507042253522No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCAGTAGGTG10.14084507042253522No Hit
GGCTTGGTAATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG10.14084507042253522No Hit
GGCTTGGTCATTTAGAGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGA10.14084507042253522No Hit
CGGAAGGATCATTACCACACCTAAAAATCTTCCACGTGAACCGTATCAGC10.14084507042253522No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCTTAGTTA10.14084507042253522No Hit
GGCTTGGTCATTTAGAGGAAGTAAGAGTCGTAACAAGGTTTCCGTAGGTG10.14084507042253522No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTCCGTAGGTGA10.14084507042253522No Hit
GGTTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG10.14084507042253522No Hit
GCTTGGTCATTTATAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGA10.14084507042253522No Hit
GACTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG10.14084507042253522No Hit
GCTTGGTCATTTAGCGGAAGTAAAAGTCGTAACAAGGTATCCGTAGGTGA10.14084507042253522No Hit
GGCTTGCTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG10.14084507042253522No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACGAGGTTTCCGTTGGTG10.14084507042253522No Hit
AGGGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGG10.14084507042253522No Hit
GGCTTGGTCATTTAGAGGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGT10.14084507042253522No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGGTTCCGTTGGTG10.14084507042253522No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTTATAACAAGGTTTCCGTAGGTG10.14084507042253522No Hit
AGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG10.14084507042253522No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.14084507042253522No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCTTAACAAGGTTTCCGTAGGTG10.14084507042253522No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)