FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITSDve554.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITSDve554.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5005
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG383776.66333666333666No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG3597.172827172827173No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG1593.176823176823177No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTG330.6593406593406593No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACGAGGTTTCCGTAGGTG220.43956043956043955No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGCTTCCGTAGGTG190.37962037962037964No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGGTCGTAACAAGGTTTCCGTAGGTG170.33966033966033965No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTTCGTAGGTG170.33966033966033965No Hit
GGCTTGGTCATTTAGAGGAAGTAAGAGTCGTAACAAGGTTTCCGTAGGTG170.33966033966033965No Hit
GGCTTGGTAATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG160.3196803196803197No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGA160.3196803196803197No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGCAACAAGGTTTCCGTAGGTG150.2997002997002997No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAGGGTTTCCGTAGGTG140.27972027972027974No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGCCGTAACAAGGTTTCCGTAGGTG140.27972027972027974No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCAGTAGGTG140.27972027972027974No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTCCCGTAGGTG140.27972027972027974No Hit
GGCTTGGTCATATAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG130.2597402597402597No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAGCAAGGTTTCCGTAGGTG120.23976023976023975No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTGGGTG120.23976023976023975No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGCG120.23976023976023975No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGCAGGTG100.1998001998001998No Hit
GGATTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG90.1798201798201798No Hit
GGCTTGGTCATTTAGAGGAAATAAAAGTCGTAACAAGGTTTCCGTAGGTG80.15984015984015984No Hit
GGCTTGGCCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG80.15984015984015984No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGAAACAAGGTTTCCGTAGGTG80.15984015984015984No Hit
GGCTTGGTCATTTAAAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG70.13986013986013987No Hit
GACTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG70.13986013986013987No Hit
GGCTTGGTTATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG70.13986013986013987No Hit
GGCTCGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG60.11988011988011987No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTACCGTAGGTG60.11988011988011987No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)