FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITSChi408.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITSChi408.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences397
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG27368.76574307304786No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG358.816120906801007No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG287.052896725440807No Hit
GGCTTGGTCATATAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG41.0075566750629723No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCAGTAGGTG41.0075566750629723No Hit
GGCTTGGTCATTAAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG30.7556675062972292No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGA30.7556675062972292No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTCCCGTAGGTG20.5037783375314862No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTACGTAGGTG20.5037783375314862No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGCCGTAACAAGGTTTCCGTAGGTG20.5037783375314862No Hit
GACTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG20.5037783375314862No Hit
AGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG20.5037783375314862No Hit
GGCTTGGTCATTTAAAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG10.2518891687657431No Hit
TTCTTTTTCCTTTCTCTTCCTTCCCCTTCTTAACAAGGTTTCCGTAGGTG10.2518891687657431No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACTAGGTTTCCGTAGGTG10.2518891687657431No Hit
GGCTTGGTCATATAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG10.2518891687657431No Hit
GGCTTGGTCATTTAGAGGAAATAAAAGTCGTAACAAGGTTTCCGTAGGTG10.2518891687657431No Hit
GGATTGGTCATTTAGAGGAAGTAAAAGACGTAACAAGGTTTCCGTAGGTG10.2518891687657431No Hit
GGCTTGATCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG10.2518891687657431No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAGCAAGGTTTCCGTAGGTG10.2518891687657431No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACGAGGTTTCCGTAGGTG10.2518891687657431No Hit
GGCTTGATAATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG10.2518891687657431No Hit
GACTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTACGTAGGTG10.2518891687657431No Hit
GGATTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG10.2518891687657431No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTTGTAACAAGGTTTCCGTAGGTG10.2518891687657431No Hit
GGATTGGTAATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG10.2518891687657431No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTCCCGTAGGTG10.2518891687657431No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAGGGTTTCCGTAGGTG10.2518891687657431No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGAAACAAGGTCTCCGTAGGTT10.2518891687657431No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCATAGGTG10.2518891687657431No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTATCAAGGTCTCCGTAGGTG10.2518891687657431No Hit
GGCCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGT10.2518891687657431No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTTCGTAGGTG10.2518891687657431No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGCTTCCGTAGGTG10.2518891687657431No Hit
GATGAGTCAGCATCGAACATGCAACATTTATTGCATGATACGTGGCATTT10.2518891687657431No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACATGGTTTCCGTAGGTG10.2518891687657431No Hit
GGCTTGGTCATTTAGAGGTAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG10.2518891687657431No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTTGGTG10.2518891687657431No Hit
GGCTTGGTCATTTAGAGGAGGTAAAAGTCGTAACAAGGTTTCCGTAGGTG10.2518891687657431No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGAAACAAGGTTTCCGTAGGTG10.2518891687657431No Hit
GGCTTGGTCATTTAGAGGAAGTAAGAGTCGTAACAAGGTTTCCGTAGGTG10.2518891687657431No Hit
CGCTTATTCTTCGTTTGCTGATGAACTAAGTCAACCTCAGCACTAACCTT10.2518891687657431No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTATCCGTAGGTG10.2518891687657431No Hit
GATTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGA10.2518891687657431No Hit
GGTTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG10.2518891687657431No Hit
GGCTTGGTTATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG10.2518891687657431No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAAGTTACCGTAGGTG10.2518891687657431No Hit
AGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG10.2518891687657431No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTACAAGGTTTCCGTAGGTGA10.2518891687657431No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)