FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITSATH305.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITSATH305.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6461
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG311348.18139606872001No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTACCGTAGGTG228135.30413248723108No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG1953.0181086519114686No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG1512.337099520198112No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTG871.3465407831605014No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGA250.38693700665531655No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTAACCGTAGGTG220.34050456585667854No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTACCGTAGGTGA150.2321622039931899No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTACCGTAGGCG130.2012072434607646No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACGAGGTTACCGTAGGTG130.2012072434607646No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACGAGGTTTCCGTAGGTG120.18572976319455192No Hit
GGCTTGGTCATTTAGAGGAAGTAAGAGTCGTAACAAGGTTTCCGTAGGTG120.18572976319455192No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAGCAAGGTTTCCGTAGGTG110.17025228292833927No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTTGTAACAAGGTTACCGTAGGTG110.17025228292833927No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGGTCGTAACAAGGTTTCCGTAGGTG110.17025228292833927No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAGGGTTTCCGTAGGTG110.17025228292833927No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTCCCGTAGGTG110.17025228292833927No Hit
GGATTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG100.1547748026621266No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGCTACCGTAGGTG100.1547748026621266No Hit
GGCTTGGTCATTTAGAGGAAGTAAGAGTCGTAACAAGGTTACCGTAGGTG100.1547748026621266No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGCTTCCGTAGGTG100.1547748026621266No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGCCGTAACAAGGTTACCGTAGGTG90.13929732239591394No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGCCGTAACAAGGTTTCCGTAGGTG90.13929732239591394No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGGTCGTAACAAGGTTACCGTAGGTG80.12381984212970129No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT80.12381984212970129No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGCAACAAGGTTTCCGTAGGTG80.12381984212970129No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGCG80.12381984212970129No Hit
GGTTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG70.10834236186348861No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTACCGTAGGTG70.10834236186348861No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTGACAAGGTTTCCGTAGGTG70.10834236186348861No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTGGGTG70.10834236186348861No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAGGGTTACCGTAGGTG70.10834236186348861No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)