FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITSATH291.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITSATH291.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences151
Sequences flagged as poor quality0
Sequence length301
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG7147.019867549668874No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCAGCCGC4127.1523178807947No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG127.9470198675496695No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT127.9470198675496695No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCATCCGC10.6622516556291391No Hit
GGCTTTGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG10.6622516556291391No Hit
GGCTTGGCCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG10.6622516556291391No Hit
GGCTTGGTCATTTAGAGGAAGCAACTCGCATCGATGAAGAACGCAGCCGC10.6622516556291391No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGCCTCCGTAGGTG10.6622516556291391No Hit
GGCTTGGTCATTTAGAGGTAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG10.6622516556291391No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACTAGGTTTCCGTAGGTG10.6622516556291391No Hit
GGCTTGGTCATTAAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG10.6622516556291391No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG10.6622516556291391No Hit
GATGAGTCAGCGTCGACAACACTATGTTGCGGTTACTCACTGTCTCTTAT10.6622516556291391No Hit
GGCTTGGTCATTTAGAGGAAGTATAAGTCGTAACAAGGTTTCCGTAGGTG10.6622516556291391No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGCG10.6622516556291391No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCTTAACAAGGTCTCCGTAGGTG10.6622516556291391No Hit
GGCTTGGTCATTTAGAAGGAAGTAACTCGCATCGATGAAGAACGCAGCCG10.6622516556291391No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCCCCGTAGGTG10.6622516556291391No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)