FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OODve918.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OODve918.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences630
Sequences flagged as poor quality0
Sequence length301
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT10416.507936507936506No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10216.19047619047619No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC7812.380952380952381No Hit
CGGAAGGATCATTACCACACAGCAGTGGATGTCTAGGCTCTGTCTCTTAT477.4603174603174605No Hit
CGGAAGGATCATTACCACCGTCGGCAGCAGTGGATGTCTAGGCTCTGTCT304.761904761904762No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCGTCAGCAGTGGATGTCTAGGC203.1746031746031744No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC142.2222222222222223No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACCATCGTGAATCTC111.746031746031746No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATTAAA91.4285714285714286No Hit
CGGAAGGATCATTACCACACCGACCACAGCAGTGGATGTCTAGGCTCTGT91.4285714285714286No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT71.1111111111111112No Hit
CGGAAGGATCATTAACACAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT60.9523809523809524No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACAGCAGTGGATGTC50.7936507936507936No Hit
CGGAAGGATCATTACCACGAGACACCAGCAGTGGATGTCTAGGCTCTGTC50.7936507936507936No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA50.7936507936507936No Hit
CGGAAGGATCATTACCACATCTCCGAGCAGCAGTGGATGTCTAGGCTCTG50.7936507936507936No Hit
CGGAAGGATCATTACCACCGCAGCAGTGGATGTCTAGGCTCTGTCTCTTA50.7936507936507936No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTAAACCACTTTGTAT40.6349206349206349No Hit
CGGAAGGATCATTACCACATCTCCAGCAGTGGATGTCTAGGCTCTGTCTC40.6349206349206349No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC30.4761904761904762No Hit
CGGAAGGATCATTACCACCGTCTGCAGCAGTGGATGTCTAGGCTCTGTCT30.4761904761904762No Hit
CGGAAGGATCATTACCACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATA30.4761904761904762No Hit
CGGAAGGATCATTACCACACCTAAAAACTTACCACGTGAACCGTATCAAC20.31746031746031744No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACCC20.31746031746031744No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT20.31746031746031744No Hit
CGGAAGGATCATTACCACACCTAAAAAACCTCCACGTGAACTGTATTAAA20.31746031746031744No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACCAGCAGTGGATGT20.31746031746031744No Hit
GATGAGTCAGCGTCGATGTTGCGGTTACTCACTGTCTCTTATACACATCT20.31746031746031744No Hit
GATGAGTCAGCGTCGAACTATGTTGCGGTTACTCACTGTCTCTTATACAC20.31746031746031744No Hit
CGGAAGGATCATTAACACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT20.31746031746031744No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTTCAAC20.31746031746031744No Hit
GATGAGTCAGCGGTTACTCACTGTCTCTTATACACATCTCCGAGCCCACG20.31746031746031744No Hit
CGGAAGGATCATTACCAAAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT20.31746031746031744No Hit
CGGAAGGATCATTATCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT20.31746031746031744No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACACCAGCAGTGGAT20.31746031746031744No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC20.31746031746031744No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGATCTGTCTCTT10.15873015873015872No Hit
CGGAAGGATCATTACCTCACCTAAAAACTTTCCACGTGAACCGTATCAAC10.15873015873015872No Hit
CGGAAGGATCATTACCACCGTCGGAAGCAGTGGATGTCTAGGCTCTGTCT10.15873015873015872No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCCTCTGTCTCT10.15873015873015872No Hit
CGGAAGGATCATTAACACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC10.15873015873015872No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCCCTGTCTCT10.15873015873015872No Hit
CGGAAGGATCATTACCACATCTCCGAGTCCACGAGACCATCGTGAATCTC10.15873015873015872No Hit
CGGAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCTCTGTCTCTTA10.15873015873015872No Hit
CGGAATGATCATTACCACTCGTCGGCAGCGTCAGCAGTGGATGTCTAGGC10.15873015873015872No Hit
GATGAGTCAGCGTCGAACATATGTTGCGGTTACTCACTGTCGCTTATACA10.15873015873015872No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGCCTAGGCTCTGTCTCTT10.15873015873015872No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACCGTATCAAC10.15873015873015872No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTTCTT10.15873015873015872No Hit
CGGAAGGATCATTACCACACATAAAAAACTTTCCACGTGAACCGTATTCA10.15873015873015872No Hit
CGGAAGGATCATTACCACAGATAGCAGTGGATGTCTAGGCTCTGGCTCTT10.15873015873015872No Hit
CGGAAGGATCATTACCACATATCGGAGCCCACGAGACACCAGCAGTGGAT10.15873015873015872No Hit
CGGAAGGATCATTACCACATCTCCCAGTCCTCGAGACCATCGTGAATCTC10.15873015873015872No Hit
CGGCCGGCAATGTATATTGGCTCCACCGGGCCGGCCGGCCTGCATCACCT10.15873015873015872No Hit
CGGAAGGATCATTACCACAGATAGCAGTGGATGTCTAGGCTCTGTCTCTT10.15873015873015872No Hit
CGGAAGAATCATTACCACTCGTCGGCAGCGTCAGCAGTGGATGTCTAGGC10.15873015873015872No Hit
CGGAAGGATCATTAACACATCTCCGAGCAGCAGTGGATGTCTAGGCTCTG10.15873015873015872No Hit
CGGAAGGACCATTACCACACAGCAGTGGATGTCTAGGCTCTGTCTCTTAT10.15873015873015872No Hit
CGGAAGGATCATTAACACACCGACCACAGCAGTGGATGTCTAGGCTCTGT10.15873015873015872No Hit
CGGAAGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTATA10.15873015873015872No Hit
CGGAAGGAGCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.15873015873015872No Hit
CGGAAGGATCATTACCACAGACAACAGTGGATGTCTAGGCTCTGTCTCTT10.15873015873015872No Hit
CGGAAGGATCATTACCACACAGCAGTGGGTATAGGCTCTGTCTCTTATAC10.15873015873015872No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAGCA10.15873015873015872No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCTCTGCCTCTT10.15873015873015872No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCATGAGACCAGCAGTGGATGT10.15873015873015872No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAACCGTATCAAA10.15873015873015872No Hit
CGGAAGGATCATTACCACACAGCAATGGATGTCTAGGCTCTGTCTCTTAT10.15873015873015872No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGC10.15873015873015872No Hit
CGGAAGGATCATTACCACACATCAGTGGATGTCTAGGCTCTGTCTCTTAT10.15873015873015872No Hit
CGGAAGGATCATTACCACACCAAAAACTATCTACGTGAACCACTTTGTAT10.15873015873015872No Hit
CGGAAGGAACATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.15873015873015872No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGATCTGTCTCT10.15873015873015872No Hit
CGGAAGGATCATTACCACATATCCGAGCCCACGAGACCATCGTGAATCTC10.15873015873015872No Hit
CGGAAGGATCATTAACACACAGCAGTGGATGTCTAGGCTCTATCTCTTAT10.15873015873015872No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAACAA10.15873015873015872No Hit
CGGAAGGATCATTACCACAGCAGTTGATGTCTAGGCTCTGTCTCTTATAC10.15873015873015872No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGAGTCTAGGCTCTGTCTCTT10.15873015873015872No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCGTCAGCAGTGGATGTCTAAGC10.15873015873015872No Hit
CGGAAGGATCATTAACACATCTCCGAGCCCACGAGAACATCGTGAATCTC10.15873015873015872No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC10.15873015873015872No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAC10.15873015873015872No Hit
CGGAAGGATCATTACCACGGGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.15873015873015872No Hit
CGGAAGGATCTTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT10.15873015873015872No Hit
CGGAAGGATCATTACCACACAGCAGTGGATGTCTAGGCTCTGTCCCTTAT10.15873015873015872No Hit
CGGAAGGATCATTACCACAGAAAGCAGTGGATGTCTAGGCTATGTCTCTT10.15873015873015872No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGTATCAAC10.15873015873015872No Hit
GATGAGTCAGCTCACTATGTTGCGGTTACTCACTGTCTCTTATACACATC10.15873015873015872No Hit
CGGAAGGTCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAACG10.15873015873015872No Hit
CGGAAGGACATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT10.15873015873015872No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCTCTGTCTTCT10.15873015873015872No Hit
CGGAAGGATCATTACCACAGACAGCAATGGATGTCTAGGCTCTGTCTCTT10.15873015873015872No Hit
CGGAAGGATCATTAACACCGTCGGCAGCAGTGGATGTCTAGGCTCTGTCT10.15873015873015872No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCTCTGTCTTTA10.15873015873015872No Hit
CGGAAGGATCATTACCACGTCGGCAGCAGTGGATGTCTAGGCTCTGTCTC10.15873015873015872No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAAGCTCTGTCTCT10.15873015873015872No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATATCTAGGCTCTGTCTCT10.15873015873015872No Hit
CGGAAGGATCATTACCACAAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.15873015873015872No Hit
GATGAGTCACTATGTTGCGGTTACTCACTGTCTCTTATACACATCTCCGA10.15873015873015872No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCCCGAGACCATCGTGAATCTC10.15873015873015872No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACACCAGCAGTGAAT10.15873015873015872No Hit
CGGAAGGATCATTACCACATCTCCGAGCAGCAGTGGATGTATAGGCTCTG10.15873015873015872No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCCCTGTCTCTT10.15873015873015872No Hit
CGGAAGGATCATTACCACATCTCCTAGCCCACGAGACCATCGTGAATCTC10.15873015873015872No Hit
CGCCCCGGCATGTACATCGGCTCCACCGGTGAGCGCGGGCTCCACCACCT10.15873015873015872No Hit
GATGAGTCAGCGTCGAACATATATTACGGTTACTCACTGTCTCTTATACA10.15873015873015872No Hit
CGGAAGGATCATTAACACTCGTCGGCAGCGTCAGCAGTGGATGTCTAGGC10.15873015873015872No Hit
CGGAAGGATCATTACCACACCATAAACTATCCACGTGAACCGCTTTGTAT10.15873015873015872No Hit
CGGAAGGATCATTACCACAAGACAGCAGTGGATGTCTAGGCTCTGTCTCC10.15873015873015872No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATATCTAGGCTCTGTCTCTT10.15873015873015872No Hit
CGGAAGGATCATTACCACCGTCGGGAGCAGTGGATGTCTAGGCTCTGTCT10.15873015873015872No Hit
CGGAAGGATCATTACCACTGTCTCTTATACACATCAGCAGTGGATGTCTA10.15873015873015872No Hit
GATTAGTCAGCGTCGATGTTGCGGTTACTCACTGTCTCTTATACACATCT10.15873015873015872No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGACCTGTCTCT10.15873015873015872No Hit
CGGAAGGATCATTACCACACAGCAGTGGATGTCTAGGCTCTGTCTCTCAT10.15873015873015872No Hit
CGGAAGGATCATTACCACACCAAAAACTATACACGTGAACCGCTTTGTAT10.15873015873015872No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAC10.15873015873015872No Hit
CGGAACGATCATTATCACGAGACCAGCTGTGGTTGTCTAGGCTCTGTCTC10.15873015873015872No Hit
CGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTCT10.15873015873015872No Hit
CGGAAGGATCATTACCACAGACAGCAGTAGATGTCTTGGCCGTGATGCTT10.15873015873015872No Hit
CGGAAGGATCATTACCACTAGGCAGCAGTGGATGTCTAGGCTCTGTCTCT10.15873015873015872No Hit
CGGAAGGATCATTACCACGAGACAGCACTGGATGTCTAGGCTCTGTCTCT10.15873015873015872No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGCGAACCACTTTGTAT10.15873015873015872No Hit
CGGAAGGATCATTACCAAGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.15873015873015872No Hit
CGGAAGGATTATTAACACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.15873015873015872No Hit
CGGAAGGATCATTACCACACATAAAAAACTTCCACGTGGACTGTATTAAA10.15873015873015872No Hit
CGGAAGGATCATTACCACAAAGCAGTGGATGTCTAGGCTCTGTCTCTTAT10.15873015873015872No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGGACCGTATCAAC10.15873015873015872No Hit
CTGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT10.15873015873015872No Hit
GATGAGTCAGCGTCGTGTAGGGAAAGAGTGTACTATGTTGCGGTTACTCA10.15873015873015872Illumina Single End PCR Primer 1 (96% over 25bp)
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATTAGA10.15873015873015872No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTGTAGGCTCTGTCTCTTATAC10.15873015873015872No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGGCTAGGCTCTGTCTCTT10.15873015873015872No Hit
CGGAAGTATCATTACCACACAGCAGTGGATGTCTAGGCTCTGTCTCTTAT10.15873015873015872No Hit
CGGAAGGATCATTACACACCCGAAAACTTTCCACGTGAACCGTATCAACA10.15873015873015872No Hit
GATGAGTCAGCGTCGAACTATGTTTCGGTTACTCACTGTCTCTTATACAC10.15873015873015872No Hit
GATGAGTCAGCGTCACTATGTTGCGGTTACTCACTGTCTCTTATACCACA10.15873015873015872No Hit
CGGAAGGATCATTACCACATCTCCGACCCCACGAGACAGCAGTGGATGTC10.15873015873015872No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC10.15873015873015872No Hit
CGGAAGGATCATTAACACACAGCAGTGGATGTCTAGGCTCTGTCTCTTAT10.15873015873015872No Hit
CGGAAGGATCTTACCACATCTCCGAGCCCACGAGACAGCAGTGAATGTCT10.15873015873015872No Hit
CGGAAGGATCATTACCACGAGACAGCAATGGATGTCTAGGCTCTGTCTCT10.15873015873015872No Hit
CGGAAGGATCATTACCACACAGCAGTGGATGTCTAGGCTCTGTCTCTTAA10.15873015873015872No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCATATCAAC10.15873015873015872No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCTCTTCTCTTA10.15873015873015872No Hit
CGGAAGGATCATTACTACAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT10.15873015873015872No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTT10.15873015873015872No Hit
CGGAAGGATCATTACCACGAGACAGAGTGGATGTCTAGGCTCTGTCTCTT10.15873015873015872No Hit
CGGAAGGATCATTACCACACCTAAAAATTTTCCACGTGAACCGTATCAAC10.15873015873015872No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCCTGTCTCTT10.15873015873015872No Hit
CGGAAGGATCATTACCATGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.15873015873015872No Hit
CGGAAGGATCATTATCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.15873015873015872No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTATCAAC10.15873015873015872No Hit
GATGAGTCAGCATCGTGTAGGGAAAGAGTGTCACTATGTTGCGGTTACTC10.15873015873015872No Hit
CGGAAGGATCATTACCACGAGACAGCAGTTGACGTGTAGGCCCTGTCTCT10.15873015873015872No Hit
CGGAAGGTCATTACCACATCTCCGAGCCCACGAGACCATCGTGAATCTCG10.15873015873015872No Hit
CGGAAGGATCATTACCACACCAAAAACTGTCCACGTGAACCACTTTGTAT10.15873015873015872No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCTCCGTCTCTT10.15873015873015872No Hit
CGGTAGGATCATTACCACACAGCAGTGGATGTCTAGGCTCTGTCTCTTAT10.15873015873015872No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)