FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OODve903.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OODve903.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1836
Sequences flagged as poor quality0
Sequence length301
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT86647.167755991285404No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA1498.115468409586056No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA1377.461873638344227No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAACCAA784.248366013071895No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAATCAA452.450980392156863No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT331.7973856209150325No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTTCCACGTGAACCGTTGTA311.6884531590413945No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAAGCAA291.579520697167756No Hit
CGGAAGGATCATTACCACGAACAGCAGTGGATGTCTAGGCTCTGTCTCTT201.0893246187363834No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC180.9803921568627451No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC150.8169934640522877No Hit
CGGAAGGATCATTACCACCAAAAACAATCCACGTGAACCGTCAGAAATAG120.6535947712418301No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCAAAAA120.6535947712418301No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTG100.5446623093681917No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACAGCAGTGGATGTCTAGGC90.49019607843137253No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT80.4357298474945534No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGCGAACCGTCAGAAAT60.32679738562091504No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTATCCACGTGAACCGTCAAA60.32679738562091504No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAGCCGTCAGAAAT60.32679738562091504No Hit
CGGAAGGATCATTACCACACAAAAAACAATCCACGTGAACCGTCAGAAAT60.32679738562091504No Hit
CGGAAGGATCATTACCACACCAAAAACAATACACGTGAACCGTCAGAAAT60.32679738562091504No Hit
CGGAAGGATCATTACCACATCCAGCAGTGGATGTCTAGGCTCTGTCTCTT60.32679738562091504No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCGGAAAT50.27233115468409586No Hit
CGGAAGGATCATTACCACACCAAAGACAATCCACGTGAACCGTCAGAAAT50.27233115468409586No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGGAAT50.27233115468409586No Hit
CGGAAGGATCATTACCACACCAAAAACAACCCACGTGAACCGTCAGAAAT50.27233115468409586No Hit
CGGAAGGATCATTACCACACCAAGAACAATCCACGTGAACCGTCAGAAAT50.27233115468409586No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAGAA40.2178649237472767No Hit
CGGAAGGATCATTACCACACCGAAAACAATCCACGTGAACCGTCAGAAAT40.2178649237472767No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAACAA40.2178649237472767No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCGCGTGAACCGTCAGAAAT40.2178649237472767No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAATCAA40.2178649237472767No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAGAT40.2178649237472767No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAAAAAA30.16339869281045752No Hit
CGGAAGGATCATTACCACACCAGAAACAATCCACGTGAACCGTCAGAAAT30.16339869281045752No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCATGTGAACCGTCAAAA30.16339869281045752No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAAACGTTAAACA30.16339869281045752No Hit
CGGAAGGATCATTACCACGCCAAAAACAATCCACGTGAACCGTCAGAAAT30.16339869281045752No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACAGTCAGAAAT30.16339869281045752No Hit
CGGAAGGATCATTACCACACCAAAAAACTAACCACGTGAACCGTTAAACA30.16339869281045752No Hit
CGGAAGGATCATTAACACACCAAAAACAATCCACGTGAACCGTCAGAAAT30.16339869281045752No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAGT30.16339869281045752No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCATAAAT30.16339869281045752No Hit
CGGAAGGATCATTACCACACCAAAAACAGTCCACGTGAACCGTCAGAAAT30.16339869281045752No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCATCAGAAAT30.16339869281045752No Hit
CGGAAGGATCATTACCCCACCAAAAACAATCCACGTGAACCGTCAGAAAT30.16339869281045752No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACTGTCTGGTA20.10893246187363835No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTTAAAC20.10893246187363835No Hit
CGGAAGGATCATTACCACGCCAAAAACAATCCACGTGAACCGTTAAGCAA20.10893246187363835No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAGCAA20.10893246187363835No Hit
CGGAAGAATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT20.10893246187363835No Hit
CGGAAGGATCATTACCACACCAAAAGCAATCCACGTGAACCGTCAGAAAT20.10893246187363835No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCTCGTGAACCGTCAGAAAT20.10893246187363835No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTTAAGC20.10893246187363835No Hit
CGGAAGGATCATTACCACGCCAAGAACTATCCACGTGAACCGTTAATCAA20.10893246187363835No Hit
CGGAAGGATATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAATA20.10893246187363835No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA20.10893246187363835No Hit
CGGAAGGATCATTACCACCAAAAAACTATCCACGTGAACCGTTAAACAAG20.10893246187363835No Hit
CGGAAGGATCATTACCACATCAAAAACAATCCACGTGAACCGTCAGAAAT20.10893246187363835No Hit
CGGAAGGACATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAATA20.10893246187363835No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCAGAAA20.10893246187363835No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTCAGAAAT20.10893246187363835No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAGCA20.10893246187363835No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGGACCGTCAGAAAT20.10893246187363835No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAC20.10893246187363835No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGGACCGTTAAACA20.10893246187363835No Hit
CGGAAGGATCATTACCACGCCAAAAAACTATCCACGTGAACCGTTAAACA20.10893246187363835No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAACCAA20.10893246187363835No Hit
CGGAAGGATCATTACCACACCAAAACAATCCACGTGAACCGTCAGAAATA20.10893246187363835No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCACGTGAACCGTTAATCAAA20.10893246187363835No Hit
TGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT20.10893246187363835No Hit
CGGAAGGATCATTACCACACCAAAACCAATCCACGTGAACCGTCAGAAAT20.10893246187363835No Hit
CGGAAGGATCATACCACACCAAAAACAATCCACGTGAACCGTCAGAAATA20.10893246187363835No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAAACAA20.10893246187363835No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGCGAACCGTCAAAA20.10893246187363835No Hit
CGGAAGGATCATTACCACGCAAAAAACTATCCACGTGAACCGTTAACCAA20.10893246187363835No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTTAAACAA20.10893246187363835No Hit
CGGAAGGATCATTACCACACCAAAAACGATCCACGTGAACCGTCAGAAAT20.10893246187363835No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)