FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OODve901.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OODve901.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8545
Sequences flagged as poor quality0
Sequence length301
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC770290.13458162668228No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAC620.7255705090696314No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAC420.49151550614394385No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAC350.40959625511995323No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC270.31597425394967815No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC230.26916325336454067No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGC200.23405500292568754No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC200.23405500292568754No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC200.23405500292568754No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACCGTATCAAC200.23405500292568754No Hit
CGGAAGGATCATTACCAAACCTAAAAACTTTCCACGTGAACCGTATCAAC180.2106495026331188No Hit
CGGAAGGATTATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC160.18724400234055003No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC150.17554125219426564No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC150.17554125219426564No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAC150.17554125219426564No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC140.16383850204798128No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAC130.1521357519016969No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTATCAAC130.1521357519016969No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAC120.1404330017554125No Hit
CGGAAGGATCATACCACACCTAAAAACTTTCCACGTGAACCGTATCAACA110.12873025160912815No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTATCAACA110.12873025160912815No Hit
CGGAAGGATCATTACCACACCCAAAAACTTTCCACGTGAACCGTATCAAC110.12873025160912815No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCTACGTGAACCGTATCAAC110.12873025160912815No Hit
CGGAAGGATCATTACCCCACCTAAAAACTTTCCACGTGAACCGTATCAAC100.11702750146284377No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTGTCAAC100.11702750146284377No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAC100.11702750146284377No Hit
CGGAAGGTCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAACA90.1053247513165594No Hit
CAGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC90.1053247513165594No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAATCGTATCAAC90.1053247513165594No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACAA90.1053247513165594No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)