FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OODve853.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OODve853.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3956
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAACAA258165.24266936299293No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTT44811.324570273003033No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTG1012.5530839231547016No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA992.5025278058645095No Hit
CGGAAGGATCATTACCACACAAAAAACTATCCACGTGAACCGTTAAACAA330.8341759352881698No Hit
CGGAAGGATCATTAACACACCAAAAACTATCCACGTGAACCGTTAAACAA310.7836198179979776No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT230.5813953488372093No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT230.5813953488372093No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAACCAA210.5308392315470172No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCGTTAAACAA160.40444893832153694No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAAACAA160.40444893832153694No Hit
CGGAAGGATCATTACCACACCAAAAACTACCCACGTGAACCGTTAAACAA160.40444893832153694No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTAAACAA150.3791708796764408No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAGCAA130.32861476238624876No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC130.32861476238624876No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTACATAC120.3033367037411527No Hit
CGGAAGGATCATTACCACACCAAAAGCTATCCACGTGAACCGTTAAACAA120.3033367037411527No Hit
CGGAAGGATCATTACCACACCAAAAACTATACACGTGAACCGTTAAACAA110.2780586450960566No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAACCAA110.2780586450960566No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACAGTTAAACAA100.2527805864509606No Hit
CGGAAGGATCATTACCACCGTCGGCAGCAGTGGATGTCTAGGCTCTGTCT100.2527805864509606No Hit
CGGAAGGATCATTACCACACAGCAGTGGATGTCTAGGCTCTGTCTCTTAT100.2527805864509606No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAACAG90.2275025278058645No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAGACAA90.2275025278058645No Hit
CGGAAGGATCATTACCACACCGAAAACTATCCACGTGAACCGTTAAACAA90.2275025278058645No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCGTTAAACAAAC90.2275025278058645No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA90.2275025278058645No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGGACCGTTAAACAA80.20222446916076847No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACTGTTAAACAA80.20222446916076847No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCGCGTGAACCGTTAAACAA80.20222446916076847No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAACGA80.20222446916076847No Hit
CGGAAGGATCATTACCACACAAAAAAAACTTACCACGTGAATCTGTACTT70.1769464105156724No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGCGAACCGTTAAACAA60.15166835187057634No Hit
TGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAACAA60.15166835187057634No Hit
CGGAAGGATCATTACCACACCAAAAAACTTACCACGTGAATCTGTACTTT60.15166835187057634No Hit
CGGAAGGATCATTATCACACCAAAAACTATCCACGTGAACCGTTAAACAA60.15166835187057634No Hit
CGGAAGGATCATACCACACCAAAAACTATCCACGTGAACCGTTAAACAAA50.1263902932254803No Hit
CGGAAGGATTATTACCACACCAAAAACTATCCACGTGAACCGTTAAACAA50.1263902932254803No Hit
CGGAAGGATCATTACCACACCAAAAACTGTCCACGTGAACCGTTAAACAA50.1263902932254803No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTGAACAA50.1263902932254803No Hit
CGGAAGGATCATTACCACACCAAGAACTATCCACGTGAACCGTTAAACAA50.1263902932254803No Hit
CGGAATGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAACAA40.10111223458038424No Hit
CGGAAGGATCATTACCACACTAAAAACTATCCACGTGAACCGTTAAACAA40.10111223458038424No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCGTTAAACAA40.10111223458038424No Hit
CGGAAGGATCATTACCACACCAGAAACTATCCACGTGAACCGTTAAACAA40.10111223458038424No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT40.10111223458038424No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAATCGTTAAACAA40.10111223458038424No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGGATCTGTACTG40.10111223458038424No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)