FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OODve848.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OODve848.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences234
Sequences flagged as poor quality0
Sequence length301
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA5523.504273504273502No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT5523.504273504273502No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAACCAA156.41025641025641No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC145.982905982905983No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT104.273504273504273No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAGTGGATGTCTAGGCTCTGT93.8461538461538463No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTTAATG62.564102564102564No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAACCAA41.7094017094017095No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC41.7094017094017095No Hit
CGGAAGGATCATTACCACACCAAAAACAATACACGTGAACCGTCAGAAAT31.282051282051282No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTATCCACGTGAACCGTTAAT31.282051282051282No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCAGAAA20.8547008547008548No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAGCCGTCAGAAAT20.8547008547008548No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCATAAAT20.8547008547008548No Hit
CGGAAGGATCATTAACACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT20.8547008547008548No Hit
CGGAAGGATCATTACCACCAAAAAACTATCCACGTGAACCGTTAAACAAG20.8547008547008548No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCATTGGATGTCTAGGCTCTGT20.8547008547008548No Hit
CGGAAGGATCATTACCACATCTGACGCTGCGACGACAGCAGTGGATGTCT20.8547008547008548No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT20.8547008547008548No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAATGA20.8547008547008548No Hit
CGGAAGGATCATTACCACACAAAAAAACTATCCACGTGAAACGTTAAACA10.4273504273504274No Hit
CGGAAGGATCATTACCACACCAAAAAACTAACCACGTGAACCGTTAAACA10.4273504273504274No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAACCAG10.4273504273504274No Hit
CGGAAGGATCATTACCACGAGGCCAGCAGTGGATGTCTAGGCTCTGTCTC10.4273504273504274No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTATCAACC10.4273504273504274No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACTGTCAGAAAT10.4273504273504274No Hit
CGGAAGGATCATTAACACACCAAAAACAATCCACGTGAACCGTCAGAAAT10.4273504273504274No Hit
CGGAAGGATCATTACCACGCCAAAAGCTATCCACGTGAACCGTTAACCAA10.4273504273504274No Hit
CGGAAGGATCATTACCACACCAAAAACAACACACGTGAACCGTCAGAAAT10.4273504273504274No Hit
CGGAAGGATCATTACCACGCCAAAAGACTATCCACGTGAACCGTTAAACA10.4273504273504274No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAACCA10.4273504273504274No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAAACGTTAAACA10.4273504273504274No Hit
CGGAAGGATCATTACCACACCCGGGATCCACGATCTTGCTCCTAGGTTAA10.4273504273504274No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCGCGTGAACCGTTAACCAA10.4273504273504274No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTTAACCAA10.4273504273504274No Hit
CGGAAGGATCATTACCACACCAAAAAAATATCCACGTGAACCGTTAAACA10.4273504273504274No Hit
CGGANGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA10.4273504273504274No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAGTGGATGTCTAGACTCTGT10.4273504273504274No Hit
CGGAAGGATCATTACCACACAAAAAACAATCCACGTGAACCGTCAGAAAT10.4273504273504274No Hit
AGACCGGCGATGTATATTGGCAACACCGACGACGGCTCGGGCCTGCACCA10.4273504273504274No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGATCTGTCTCT10.4273504273504274No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCGCTGGCTCT10.4273504273504274No Hit
CGGAAGGATCATTACCACACCAAAAAATTATCCACGTGAACCGTTAAACA10.4273504273504274No Hit
CGGAAGGATCATTAACACACCTAAAAAACTATCCACGTGAACCGTTAAGC10.4273504273504274No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAATCGTTAAACA10.4273504273504274No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAGTGGACGTCTAGGCTCTGT10.4273504273504274No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAAACAA10.4273504273504274No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTATCCACGTGAACCGTTAAA10.4273504273504274No Hit
GGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACAA10.4273504273504274No Hit
CTGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.4273504273504274No Hit
CGGAAGGATCATTAACACGTCGTCGGCAGCAGGGGATGTCTAGGCTCTGT10.4273504273504274No Hit
CGGAAGGATCATTACCACACAAAAAAACTATCCACGTGAACCGTTAAACA10.4273504273504274No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTAAACCGTCAGAAAT10.4273504273504274No Hit
CGGAAGGATCATTACCACACAAAAAACTATCCACGTGAACCGTTAAACAA10.4273504273504274No Hit
CGGAAGGATCATTACCACACCAAAAGCAATCCACGTGAACCGTCAGAAAT10.4273504273504274No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTATCCAAGTGAACCGTTAAT10.4273504273504274No Hit
CGGAAGGATCATTACCACTCCAAAAACAATCCACGTGAACCGTCAGAAAT10.4273504273504274No Hit
CGGAAGGATCATTACCACGTCGTCGGCATCAGTGGATGTCTAGGCTCTGT10.4273504273504274No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)