FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OODve845.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OODve845.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences568
Sequences flagged as poor quality0
Sequence length301
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC32657.3943661971831No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC508.80281690140845No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT396.866197183098592No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC274.753521126760563No Hit
CGGAAGGATCATTACCACCGTCGGCAGCAGTGGATGTCTAGGCTCTGTCT193.345070422535211No Hit
CGGAAGGATCATTACCACTGCAGCAGTGGATGTCTAGGCTCTGTCTCTTA152.640845070422535No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT91.584507042253521No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC40.7042253521126761No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACATGAACCGTATCAAC30.528169014084507No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAC30.528169014084507No Hit
CGGAAGGATCATTACCACACTTAAAAACTTTCCACGTGAACCGTATCAAC30.528169014084507No Hit
CGGAAGGATCATTAACACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT20.35211267605633806No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAC20.35211267605633806No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAC20.35211267605633806No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAC20.35211267605633806No Hit
CGGAAGGATATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAACA20.35211267605633806No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACAA20.35211267605633806No Hit
CGGAAGGATCATTACCACACCAAAAAAACTCATCCCTCGTGAACTTGTAC20.35211267605633806No Hit
CGGAAGGATCATTACCACCCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC20.35211267605633806No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGCATGTCTAGGCTCTGTCTC10.17605633802816903No Hit
CGGAAGGATCATTACCACACCAAAAATCTTTCCATGTGAACCGTATCAAC10.17605633802816903No Hit
CGGAAGGATCATTACCACTCGTCAGCAGGGGATGTCTAGGCTCTGTCTCT10.17605633802816903No Hit
GGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAACA10.17605633802816903No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGTATGTCTAGGCTCTGTCTC10.17605633802816903No Hit
CGGAAGGAACATTACCACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT10.17605633802816903No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACCGTATCAAC10.17605633802816903No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAC10.17605633802816903No Hit
GGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.17605633802816903No Hit
AGGCCTGCCATGTACATAGGCGACACGTCCGACGGCACCGGCCTGCACCA10.17605633802816903No Hit
CGGAAGGATCATTACCACCGTCGGCAGCAGTTGATGTCTAGGCTCTGTCT10.17605633802816903No Hit
CGGAATGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC10.17605633802816903No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAC10.17605633802816903No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTTTGTCTC10.17605633802816903No Hit
CGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAACA10.17605633802816903No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGTACCGTATCAAC10.17605633802816903No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCTTATCAAC10.17605633802816903No Hit
CGGAAGGATCATTAACACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC10.17605633802816903No Hit
GATTAGTCAGCGTCGAACATGCAACATTTATCGCATGATACGTGGCATTT10.17605633802816903No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC10.17605633802816903No Hit
AGGAAGGAGCAGTAGAAAAACGAAAAACTTTCCACGGGAACCGTAGAAAC10.17605633802816903No Hit
CGGAAGGACCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.17605633802816903No Hit
CGGAAGGATCATTACAACTGCAGCAGTGGATGTCTAGGCTCTGTCTCTTA10.17605633802816903No Hit
CGGAAGGAGCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCCCTGTC10.17605633802816903No Hit
CGGAAGGATCATTAACACTGCAGCAGTGGATGTCTAGGCTCTGTCTCTTA10.17605633802816903No Hit
CGGAAGGATCATTAACAATCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC10.17605633802816903No Hit
CGGAAGGAGAAGGAAAAAAAAGAAAAAAGGTCGACGTGAACCGTATCAAC10.17605633802816903No Hit
CGGAAGGATCATTACCACACCCAAAAACTTTCCACGTGAACCGTATCAAC10.17605633802816903No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACCGTATCAAC10.17605633802816903No Hit
CGGAAGGATCATCACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC10.17605633802816903No Hit
CGGAAGGATCATTACCACTCGTAGGCAGCAGTGGATGTCTAGGCTCTGTC10.17605633802816903No Hit
CGGAAGGATCATTACCACAGTCGGCAGCAGTGGATGTCTAGGCTCTGTCT10.17605633802816903No Hit
CGGAAGGATTATTACCACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT10.17605633802816903No Hit
CGGAAGGATCATTACCACACGTCGGCAGCAGTGGATGTCTAGGCTCTGTC10.17605633802816903No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC10.17605633802816903No Hit
GATTAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT10.17605633802816903No Hit
CGGAAGGATCATTACCACCGGCGGCAGCAGTGGATGTCTAGGCTCTGTCT10.17605633802816903No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT10.17605633802816903No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC10.17605633802816903No Hit
CGGAATGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT10.17605633802816903No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTATCAAC10.17605633802816903No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC10.17605633802816903No Hit
AGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.17605633802816903No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACAGTATCAAC10.17605633802816903No Hit
CGGAAGGATCATTACCACCGTCGGCAGCAGTGGATATCTAGGCTCTGTCT10.17605633802816903No Hit
CGGAAGGATCATAACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC10.17605633802816903No Hit
CGGAAGGATCATTATCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.17605633802816903No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC10.17605633802816903No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA10.17605633802816903No Hit
CGGAAGGATCATTTCCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.17605633802816903No Hit
CGGAAGGATCATTACCAACGTCGGCAGCAGTGGATGTCTAGGCTCTGTCT10.17605633802816903No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTATCAACG10.17605633802816903No Hit
CGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTCT10.17605633802816903No Hit
CGGAAGGTCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAACA10.17605633802816903No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)