FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OODve841.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OODve841.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences233
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT7030.042918454935624No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC5724.463519313304722No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT166.866952789699571No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT146.008583690987124No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCTCTGTCTCTTA73.004291845493562No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC41.7167381974248928No Hit
CGGAAGGATCATTACCACATCCAGCAGTGGATGTCTAGGCTCTGTCTCTT41.7167381974248928No Hit
CGGAAGGATCATTACCACACAAAAAACTATCCACGTGAACCGCTTTGTAT31.2875536480686696No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT31.2875536480686696No Hit
CGGAAGGATCATTAACACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT20.8583690987124464No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAC20.8583690987124464No Hit
CGGAAGGATCATTACCACACCAAAAGCTATCCACGTGAACCGCTTTGTAT20.8583690987124464No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAC20.8583690987124464No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCGCTTTGTATTG20.8583690987124464No Hit
CGGAAGGATCATTACCACACCTAAAACCTTTCAACGTGAACCGTATCAAC20.8583690987124464No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACAA20.8583690987124464No Hit
CGGAAGGATCATCACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.4291845493562232No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAAGCAGTGGATGTCTAG10.4291845493562232No Hit
CGGAAGGATCATTAACACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT10.4291845493562232No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACAAGACAGCAGTGGATGTC10.4291845493562232No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAC10.4291845493562232No Hit
CGGAAGGATCATTACCACACCAAAGACTATCCACGTGGACCGCTTTGTAT10.4291845493562232No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCGCTTTGTAT10.4291845493562232No Hit
CGGAAGCATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT10.4291845493562232No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTACACGTGAACCGTATCAAC10.4291845493562232No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAACCGCTTTGTA10.4291845493562232No Hit
CGGAATGATCATTAACACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT10.4291845493562232No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGTATGTCTAGGCTCTGTCTCT10.4291845493562232No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGATTTGTAT10.4291845493562232No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCCTTGTAT10.4291845493562232No Hit
CGGAAGTATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.4291845493562232No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTATCGTTAT10.4291845493562232No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCTTATCAAC10.4291845493562232No Hit
CGGAAGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAACA10.4291845493562232No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC10.4291845493562232No Hit
CGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCTT10.4291845493562232No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCCCGTGAACCGTATCAAC10.4291845493562232No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCCCTGTCTCT10.4291845493562232No Hit
CGGAAGGATCATTACCACACGTCAGCAGTGGATGTTTAGGTCTGTCTCTT10.4291845493562232No Hit
CGGAAGGATCATTAACACACAAAAAACTATCCACGTGAACCGCTTTGTAT10.4291845493562232No Hit
CGGAAGGATCATTACCACACCTAAAAACTGTCCACGTGAACCGCTTTGTA10.4291845493562232No Hit
CGGAAGGATCATTACCACACAAAAAACTATCCACGTGAACAGCTTTGTAT10.4291845493562232No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAC10.4291845493562232No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACCGTATCAAC10.4291845493562232No Hit
CGGAAGGATCATTACCACATCTCCGACCCAGCAGTGGATGTCTAGGCTCT10.4291845493562232No Hit
GATTAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT10.4291845493562232No Hit
CGGAAGGATCTTACAACACCTAAAAACTTTCCACGTGAACCGTATCAACA10.4291845493562232No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC10.4291845493562232No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGGACCGCTTTGTAT10.4291845493562232No Hit
CGGAAGGATCATTAACACACCAAAAACTATCCACGTGAACCGCTTTGTAT10.4291845493562232No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGCGAACCGCTTTGTAT10.4291845493562232No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC10.4291845493562232No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACAGCTTTGTAT10.4291845493562232No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACCGTAACAAC10.4291845493562232No Hit
CGGAAGGATCATTACCACGACAGCAATGGATGTCTAGGCTCTGTCTCTTA10.4291845493562232No Hit
CGGAAGGATCATTACCACACTTAAAAACTTTCCACGTGAACCGTATCAAC10.4291845493562232No Hit
CGGAGGGATCATTACCACATCCAGCAGTGGATGTCTAGGCTCTGTCTCTT10.4291845493562232No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)