FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OODve832.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OODve832.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5849
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT400268.42195247050778No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT1913.2655154727303812No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA1482.5303470678748505No Hit
CGGAAGGATCATTAACACACCAAAAACTATCCACGTGAACCACTTTGTAT1232.1029235766797743No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA1051.7951786630193196No Hit
CGGAAGGATCATTACCACACAAAAAACTATCCACGTGAACCACTTTGTAT961.6413062061890922No Hit
CGGAAGGATCATTACCACACCAAAAACTATACACGTGAACCACTTTGTAT821.4019490511198496No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA611.0429133185159856No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACAACTTTGTAT530.9061378013335613No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCACTTTGTATTG410.7009745255599248No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGGACCACTTTGTAT240.41032655154727304No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCACTTTGTAT220.37613267225166697No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCAATTTGTAT210.3590357326038639No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCACTTTGTAT200.34193879295606083No Hit
CGGAAGGATCATTACCACACCAAAAGCTATCCACGTGAACCACTTTGTAT200.34193879295606083No Hit
CGGAAGGATCATTACCACACCAAAAACTACCCACGTGAACCACTTTGTAT170.29064797401265174No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCGCGTGAACCACTTTGTAT160.2735510343648487No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTCGTAT160.2735510343648487No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTCTGTAT140.23935715506924257No Hit
CGGAAGGATCATTACCACACCAAGAACTATCCACGTGAACCACTTTGTAT140.23935715506924257No Hit
CGGAAGGATCATTACCACACCAAAACTATCCACGTGAACCACTTTGTATT140.23935715506924257No Hit
CGGAAGGATCATTACCACACCAAAGACTATCCACGTGAACCACTTTGTAT130.2222602154214396No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCACTTTGTAT130.2222602154214396No Hit
CGGAAGGATCATTACCACACCAAAAACTGTCCACGTGAACCACTTTGTAT130.2222602154214396No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGCGAACCACTTTGTAT120.20516327577363652No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAC120.20516327577363652No Hit
CGGAAGGATCATTACCAAACCAAAAACTATCCACGTGAACCACTTTGTAT120.20516327577363652No Hit
CGGAAGGATCATTACCACACTAAAAACTATCCACGTGAACCACTTTGTAT120.20516327577363652No Hit
CGGAAGGATCATTACCACACCAGAAACTATCCACGTGAACCACTTTGTAT110.18806633612583348No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACCTTGTAT110.18806633612583348No Hit
CGGAAGGATCATTACCACACACAGCAGTGGATGTCTAGGCTCTGTCTCTT100.17096939647803042No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTCAGAAAT100.17096939647803042No Hit
CGGAAGGATCATTACCACACAAAAAACTATCCACGTGAACAACTTTGTAT90.1538724568302274No Hit
CGGAAGGATCATACCACACCAAAAACTATCCACGTGAACCACTTTGTATT80.13677551718242434No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTGT80.13677551718242434No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACTACTTTGTAT70.11967857753462129No Hit
TGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT70.11967857753462129No Hit
CGGAAGGATCATTACCCCACCAAAAACTATCCACGTGAACCACTTTGTAT70.11967857753462129No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCACTTTGT70.11967857753462129No Hit
CGGAAGGATCATTACCACACCGAAAACTATCCACGTGAACCACTTTGTAT70.11967857753462129No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT60.10258163788681826No Hit
CGGAAGGATTATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT60.10258163788681826No Hit
CGGAAGGATCATTACCACACAAAAAACTATACACGTGAACCACTTTGTAT60.10258163788681826No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACATGAACCACTTTGTAT60.10258163788681826No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTATCAAAC60.10258163788681826No Hit
CGGAAGGATCATTACCACATCAAAAACTATCCACGTGAACCACTTTGTAT60.10258163788681826No Hit
CGGAAGGTCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTATT60.10258163788681826No Hit
CGGAAGGATCTTACCACACCAAAAACTATCCACGTGAACCACTTTGTATT60.10258163788681826No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAATCACTTTGTAT60.10258163788681826No Hit
CGGAAGGATCATTACCACACAAAAAACAATCCACGTGAACCGTCAGAAAT60.10258163788681826No Hit
CGGAAGGATCATTACCACACCAAAAACTATCTACGTGAACCACTTTGTAT60.10258163788681826No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCACTTTGTAT60.10258163788681826No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)