FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OODve831.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OODve831.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1706
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC72542.49706916764361No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTTGTAAA26315.41617819460727No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA21512.602579132473624No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC472.7549824150058617No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC362.1101992966002343No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT231.3481828839390386No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAA170.996483001172333No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAC130.7620164126611958No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA120.7033997655334115No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTGTAAA90.5275498241500586No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAC90.5275498241500586No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGC70.4103165298944901No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC60.3516998827667058No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTATCAACA60.3516998827667058No Hit
CGGAAGGATCATTACCACTGCAGCAGTGGATGTCTAGGCTCTGTCTCTTA60.3516998827667058No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCAGCAGTGGATGTCTAGGCTC60.3516998827667058No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACAA60.3516998827667058No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAC60.3516998827667058No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAC50.29308323563892147No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACCGTATCAAC50.29308323563892147No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAC40.23446658851113714No Hit
CGGAAGGATCATTACCACCAAAAAACTATCCACGTGAACCGTTAAACAAG40.23446658851113714No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC40.23446658851113714No Hit
CGGAAGGATCATTAACACACCAAAAAACTATCCACGTGAACCGTTAAACA40.23446658851113714No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGTTAAACA40.23446658851113714No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT40.23446658851113714No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTAAACCGTATCAAC40.23446658851113714No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAC40.23446658851113714No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGATAAACA30.1758499413833529No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGGACCGTTGTAAA30.1758499413833529No Hit
CGGAAGGATCATTACCACACCAAAAAGCTATCCACGTGAACCGTTAAACA30.1758499413833529No Hit
CGGAAGGATCATTACCACACCTTAAAACTATCCACGTGAACCGTTTGTAC30.1758499413833529No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT30.1758499413833529No Hit
CGGAAGGATCATTAACACACCATAAAACTTTCCACGTGAACCGTTGTAAA30.1758499413833529No Hit
CGGAAGGATCATTACCACACCATAAAAATTTCCACGTGAACCGTTGTAAA30.1758499413833529No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC30.1758499413833529No Hit
CGGAAGGATCATTACCACACCAAAAACAAACCCACGTGAACCGTTAACAA30.1758499413833529No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTATCAAC30.1758499413833529No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAAACGTTAAACA30.1758499413833529No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAGCCGTTGTAAA30.1758499413833529No Hit
CGGAAGGATCATTACCACACCTAAGAACTTTCCACGTGAACCGTATCAAC30.1758499413833529No Hit
CGGAAGGATCATTACCACACCCAAAAACTTTCCACGTGAACCGTATCAAC30.1758499413833529No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTGTCAAC30.1758499413833529No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC30.1758499413833529No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTATCAAC30.1758499413833529No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTTTTAAA30.1758499413833529No Hit
CGGAAGGATCATTACCACGCCATAAAACTTTCCACGTGAACCGTTGTAAA20.11723329425556857No Hit
CGGAAGGATCATTACCACACAATAAAACTTTCCACGTGAACCGTTGTAAA20.11723329425556857No Hit
CGGAAGGATCATTACCACCATAAAACTTTCCACGTGAACCGTTGTAAATA20.11723329425556857No Hit
CGGAAGGATCATTACTACACCTAAAAACTTTCCACGTGAACCGTATCAAC20.11723329425556857No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCTCGTGAACCGTATCAAC20.11723329425556857No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTTGTAGA20.11723329425556857No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTAAACA20.11723329425556857No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTAAC20.11723329425556857No Hit
CGGAAGGATCATTACCACACCAAAAAAATATCCACGTGAACCGTTAAACA20.11723329425556857No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGCTGTAAA20.11723329425556857No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC20.11723329425556857No Hit
CGGAAGGATCATTACCAAACCTAAAAACTTTCCACGTGAACCGTATCAAC20.11723329425556857No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAAACGTTGTAAA20.11723329425556857No Hit
CGGAAGGATCATTACCACACCAAAAAAACATCCACGTGAACCGTTCAATA20.11723329425556857No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTTAACCGTATCAAC20.11723329425556857No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCATCAAC20.11723329425556857No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCTCGTGAACCGTTGTAAA20.11723329425556857No Hit
CGGAGGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTTGTAAA20.11723329425556857No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAT20.11723329425556857No Hit
CGGAAGGATCATTACCACACAAAAAAACTATCCACGTGAACCGTTAAACA20.11723329425556857No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAC20.11723329425556857No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCAGGCTCTGTCTCT20.11723329425556857No Hit
CGGAAGGATCATTACCACACCTAAGAACTTTCCACGTAAACCGTATCAAC20.11723329425556857No Hit
CGGAAGGATCATTACCATACCTAAAAACTTTCCACGTGAACCGTATCAAC20.11723329425556857No Hit
CGGAAGGATCATTACCACACCAAAAAACCATCCACGTGAACCGTTCAATA20.11723329425556857No Hit
CGGAAGGATCATTACCACACCATAAAACTCTCCACGTGAACCGTTGTAAA20.11723329425556857No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTATCAAC20.11723329425556857No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTATCAAC20.11723329425556857No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)