FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OODve830.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OODve830.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6646
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT381757.433042431537764No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC141021.21576888353897No Hit
CGGAAGGATCATTACCACACAAAAAACTATCCACGTGAACCGCTTTGTAT771.1585916340656035No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTATCAACA691.0382184772795666No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCTTTGTA590.8877520312970207No Hit
CGGAAGGATCATTAACACACCAAAAACTATCCACGTGAACCGCTTTGTAT460.6921456515197111No Hit
CGGAAGGATCATTACCACACCAAAAACTATACACGTGAACCGCTTTGTAT400.6018657839301835No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACAGCTTTGTAT390.586819139331929No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCGCTTTGTATTG330.4965392717424014No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCGCTTTGTAT290.43635269334938315No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGCTTTGTAT250.37616611495636476No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAC230.34607282575985554No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGGACCGCTTTGTAT190.2858862473668372No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGCGAACCGCTTTGTAT190.2858862473668372No Hit
CGGAAGGATCATTACCACACCAAAAACTACCCACGTGAACCGCTTTGTAT170.25579295817032804No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTCGTAT170.25579295817032804No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCCTTGTAT160.24074631357207343No Hit
CGGAAGGATCATTACCACACCAAGAACTATCCACGTGAACCGCTTTGTAT160.24074631357207343No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTCTGTAT160.24074631357207343No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAC150.22569966897381882No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGCTTTGTAT150.22569966897381882No Hit
CGGAAGGATCATTACCACACCAAAGACTATCCACGTGAACCGCTTTGTAT140.21065302437556424No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCGCGTGAACCGCTTTGTAT140.21065302437556424No Hit
CGGAAGGATCATTACCACACCGAAAACTATCCACGTGAACCGCTTTGTAT130.19560637977730969No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAC130.19560637977730969No Hit
CGGAAGGATCATTACCACACCAAAAGCTATCCACGTGAACCGCTTTGTAT120.18055973517905505No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAC110.1655130905808005No Hit
CGGAAGGATCATTACCAAACCAAAAACTATCCACGTGAACCGCTTTGTAT110.1655130905808005No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC110.1655130905808005No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGCTTTGTA100.15046644598254588No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAC100.15046644598254588No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCATGTGAACCGCTTTGTAT100.15046644598254588No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACAA100.15046644598254588No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCGCTTTGTAT90.1354198013842913No Hit
TGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT90.1354198013842913No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACCGTATCAAC90.1354198013842913No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTGT90.1354198013842913No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC90.1354198013842913No Hit
CGGAAGGATCATTACCACACCAAAAACTGTCCACGTGAACCGCTTTGTAT90.1354198013842913No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTATCAAC80.12037315678603672No Hit
CGGAAGGATCATTACCACACCAAAAACTTTCCACGTGAACCGCTTTGTAT80.12037315678603672No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGTACCGCTTTGTAT80.12037315678603672No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTAAACCGCTTTGTAT80.12037315678603672No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAATCGCTTTGTAT70.10532651218778212No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC70.10532651218778212No Hit
CGGAAGGATCATTACTACACCAAAAACTATCCACGTGAACCGCTTTGTAT70.10532651218778212No Hit
CGGAAGGATCATTACCACACCAGAAACTATCCACGTGAACCGCTTTGTAT70.10532651218778212No Hit
CGGAAGGATCATTACCCCACCAAAAACTATCCACGTGAACCGCTTTGTAT70.10532651218778212No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC70.10532651218778212No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)