FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OODve828.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OODve828.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1067
Sequences flagged as poor quality0
Sequence length301
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA25523.89878163074039No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT25223.617619493908155No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT847.872539831302718No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC444.123711340206185No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTT373.467666354264293No Hit
CGGAAGGATCATTACCACGTCGTCGTCAGCAGTGGATGTCTAGGCTCTGT363.373945641986879No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACGCGTATACATCTC322.999062792877226No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA292.7179006560449857No Hit
CGGAAGGATCATTACCACGCCAGCAGTGGATGTCTAGGCTCTGTCTCTTA161.499531396438613No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCGTCAGCAGTGGATGTCTAGGC111.0309278350515463No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC100.937207122774133No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACAGCAGTGGATGTC90.8434864104967198No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAAACGTTAAACA60.5623242736644799No Hit
CGGAAGGATCATTACCACACAAAAAACAATCCACGTGAACCGTCAGAAAT60.5623242736644799No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAACAA50.4686035613870665No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGATCTGTCTCT40.37488284910965325No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAGCCGTCAGAAAT40.37488284910965325No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAGACA40.37488284910965325No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACG40.37488284910965325No Hit
CGGAAGGATCATTACCACACCAAAGAACTATCCACGTGAACCGTTAAACA40.37488284910965325No Hit
CGGAAGGATCATTACCACCAAAAAACTATCCACGTGAACCGTTAAACAAG30.28116213683223995No Hit
CGGAAGGATCATTAACACACCAAAAAACTATCCACGTGAACCGTTAAACA30.28116213683223995No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT30.28116213683223995No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGGACCGTTAAACA30.28116213683223995No Hit
CGGAAGGATCATTACCACACAAAAAAACTATCCACGTGAACCGTTAAACA30.28116213683223995No Hit
CGGAAGGATCATTACCACGCCAAAAAACTATCCACGTGAACCGTTAAACA30.28116213683223995No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACGCGTATACAACTC20.18744142455482662No Hit
CGGAAGGATCATTACCACATCTCCGAGCAGCAGTGGATGTCTAGGCTCTG20.18744142455482662No Hit
CGGAAGGATCATTACCACTCCAAAAAACTATCCACGTGAACCGTTAAACA20.18744142455482662No Hit
CGGAAGGATCATTACCACAAGACAGCAGTGGATGTCTAGGCTCTGTCTCT20.18744142455482662No Hit
CGGAAGTATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT20.18744142455482662No Hit
CGGAAGGATCATTACCACACTAAAAAACTATCCACGTGAACCGTTAAACA20.18744142455482662No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGCGAACCGTTAAACA20.18744142455482662No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCAGAAA20.18744142455482662No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGAAGCGTATACATCTC20.18744142455482662No Hit
CGGAAGGATCATTACCACCAAAAACAATCCACGTGAACCGTCAGAAATAG20.18744142455482662No Hit
CGGAAGGATCATTACCACGCCAAAAACAATCCACGTGAACCGTCAGAAAT20.18744142455482662No Hit
CGGAAGGATCATTACCACCGTCGGCAGCAGTGGATGTCTAGGCTCTGTCT20.18744142455482662No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGCTAAACA20.18744142455482662No Hit
CGGAAGGATCATTAACACACCAAAAACAATCCACGTGAACCGTCAGAAAT20.18744142455482662No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAGTGGATGTCTAGGCTCTGT20.18744142455482662No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCATAAAT20.18744142455482662No Hit
CGGAAGGATCATTACCACCTCGGCAGCAGTGGATGTCTAGGCTCTGTCTC20.18744142455482662No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTTAAACAA20.18744142455482662No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)