FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OODve827.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OODve827.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1987
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT132266.5324609964771No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC492.4660291897332662No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT402.0130850528434827No Hit
CGGAAGGATCATTACCACACCAGCAGTGGATGTCTAGGCTCTGTCTCTTA331.660795168595873No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC251.2581781580271767No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACGCGTATACATCTC241.2078510317060895No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC241.2078510317060895No Hit
CGGAAGGATCATTACCACATCTCCGAGCCAGCAGTGGATGTCTAGGCTCT221.1071967790639154No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCACTTTGTATTG211.0568696527428285No Hit
CGGAAGGATCATTACCACCCGACCAGCAGTGGATGTCTAGGCTCTGTCTC170.8555611474584801No Hit
CGGAAGGATCATTACCACACAAAAAACTATCCACGTGAACCACTTTGTAT160.8052340211373931No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTATCAAAC130.6542526421741319No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGCAT120.6039255158530448No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACAACTTTGTAT110.5535983895319577No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT110.5535983895319577No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC110.5535983895319577No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGGACCACTTTGTAT90.45294413688978363No Hit
CGGAAGGATCATTAACACACCAAAAACTATCCACGTGAACCACTTTGTAT90.45294413688978363No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCACTTTGTAT80.40261701056869653No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTCGTAT70.35228988424760943No Hit
CGGAAGGATCATTACCACACCAAGAACTATCCACGTGAACCACTTTGTAT60.3019627579265224No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCACTTTGTAT60.3019627579265224No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCTCTTTGTAT60.3019627579265224No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAC60.3019627579265224No Hit
CGGAAGGATCATTACCACACCGAAAACTATCCACGTGAACCACTTTGTAT60.3019627579265224No Hit
CGGAAGGATCATTACCACACCAAAAACTATACACGTGAACCACTTTGTAT50.25163563160543534No Hit
CGGAAGGATCATTACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATACAC50.25163563160543534No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTAAACCACTTTGTAT50.25163563160543534No Hit
CGGAAGGATCATTACCACACCAAAAACTACCCACGTGAACCACTTTGTAT40.20130850528434827No Hit
CGGAAGGATTATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT40.20130850528434827No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTCTGTAT40.20130850528434827No Hit
CGGAAGGATCATTACCACACCAAAGACTATCCACGTGAACCACTTTGTAT40.20130850528434827No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCGCGTGAACCACTTTGTAT40.20130850528434827No Hit
CGGAAGGATCATTACCAAACCAAAAACTATCCACGTGAACCACTTTGTAT40.20130850528434827No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACCAGCAGTGGATGT40.20130850528434827No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACCTTGTAT40.20130850528434827No Hit
CGGAAGGATCATTACCACACCAAAAGCTATCCACGTGAACCACTTTGTAT40.20130850528434827No Hit
CGGAAGGATCATACCACACCAAAAACTATCCACGTGAACCACTTTGTATT30.1509813789632612No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCATGTGAACCACTTTGTAT30.1509813789632612No Hit
CGGAAGGATCATTACCACACCAAAACTATCCACGTGAACCACTTTGTATT30.1509813789632612No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGCGAACCACTTTGTAT30.1509813789632612No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTGGTAT30.1509813789632612No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAA30.1509813789632612No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACTACTTTGTAT30.1509813789632612No Hit
CGGAAGGATCTTACCACACCAAAAACTATCCACGTGAACCACTTTGTATT30.1509813789632612No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACCC30.1509813789632612No Hit
CGGAAGGATCATTACCACACCAAAAACTATCTACGTGAACCACTTTGTAT30.1509813789632612No Hit
CGGAAGGATCATTACCCCACCAAAAACTATCCACGTGAACCACTTTGTAT30.1509813789632612No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTGT30.1509813789632612No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT20.10065425264217413No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC20.10065425264217413No Hit
CGGAAGGATCATTACCACACCAAAAACTAACCACGTGAACCACTTTGTAT20.10065425264217413No Hit
CGGAAGGATCATTACCACATCAAAAACTATCCACGTGAACCACTTTGTAT20.10065425264217413No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCAATTTGTATTG20.10065425264217413No Hit
CGGAAGGATCATTACCACACCAAAATCTATCCACGTGAACCACTTTGTAT20.10065425264217413No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGAACAGCAGTGGATGT20.10065425264217413No Hit
CGGAAGGATCATTACCACACCAAAAACTATCACGTGAACCACTTTGTATT20.10065425264217413No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAATCACTTTGTAT20.10065425264217413No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGTACCGTATCAAC20.10065425264217413No Hit
CGGAAGGATCATTACCACACCAGAAACTATCCACGTGAACCACTTTGTAT20.10065425264217413No Hit
CGGAAGGATCATTACCACACCACAAACTATCCACGTGAACCACTTTGTAT20.10065425264217413No Hit
CGGAAGGATCATTACCACACCAAAACCTATCCACGTGAACCACTTTGTAT20.10065425264217413No Hit
CGGAAGGATCATTACCACACTAAAAACTATCCACGTGAACCACTTTGTAT20.10065425264217413No Hit
CGGAAGGATCATTATCACACCAAAAACTATCCACGTGAACCACTTTGTAT20.10065425264217413No Hit
CGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTATT20.10065425264217413No Hit
CGGAAGGATCATTACCACACCAGCATTGGATGTCTAGGCTCTGTCTCTTA20.10065425264217413No Hit
CGGAAGGATCATTACCACTCGTCGTCAGCAGTGGATGTCTAGGCTCTGTC20.10065425264217413No Hit
CGGAAGGATCATTACCACACAAGCAGTGGATGTCTAGGCTCTGTCTCTTA20.10065425264217413No Hit
CGGAAGGATCATTACCACACCAAAAACTGTCCACGTGAACCACTTTGTAT20.10065425264217413No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)