FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OODve820.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OODve820.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5001
Sequences flagged as poor quality0
Sequence length301
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT276955.36892621475705No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTTAAAT106921.375724855028995No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA460.9198160367926416No Hit
CGGAAGGATCATTACCACTTCAGCAGTGGATGTCTAGGCTCTGTCTCTTA360.7198560287942412No Hit
CGGAAGGATCATTACCACCAAAAACAATCCACGTGAACCGTCAGAAATAG340.6798640271945611No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCATAAAT330.6598680263947211No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT260.5198960207958409No Hit
CGGAAGGATCATTACCACACAAAAAACAATCCACGTGAACCGTCAGAAAT250.49990001999600076No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAGTGGATGTCTAGGCTCTGT250.49990001999600076No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTTTAAATA220.43991201759648074No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACAGTCAGAAAT200.39992001599680066No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA190.3799240151969606No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT180.3599280143971206No Hit
CGGAAGGATCATTACCACTCCGACCACAGCAGTGGATGTCTAGGCTCTGT180.3599280143971206No Hit
CGGAAGGATCATTAACACACCAAAAACAATCCACGTGAACCGTCAGAAAT170.33993201359728054No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGGAAT160.3199360127974405No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAGAT150.2999400119976005No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGCCAGAAAT140.27994401119776047No Hit
CGGAAGGATCATTACCACGCCAAAAACAATCCACGTGAACCGTCAGAAAT140.27994401119776047No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCGGAAAT130.2599480103979204No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGCGAACCGTCAGAAAT130.2599480103979204No Hit
CGGAAGGATCATTACCACACCAAAAACAATACACGTGAACCGTCAGAAAT130.2599480103979204No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTTTAAATAT130.2599480103979204No Hit
CGGAAGGATCATTACCACACCAAGAACAATCCACGTGAACCGTCAGAAAT130.2599480103979204No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCGCGTGAACCGTCAGAAAT110.21995600879824037No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAGCCGTCAGAAAT110.21995600879824037No Hit
CGGAAGGATCATTACCACACCAAAAACAGTCCACGTGAACCGTCAGAAAT110.21995600879824037No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTTTAAAT100.19996000799840033No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTTTAAAT90.1799640071985603No Hit
CGGAAGGATCATTACCACACCAAAAGCAATCCACGTGAACCGTCAGAAAT90.1799640071985603No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTTTAAAT90.1799640071985603No Hit
CGGAAGGATCATTACCACACCAAAACAATCCACGTGAACCGTCAGAAATA90.1799640071985603No Hit
CGGAAGGATCATTACCACACCAAAAACAACCCACGTGAACCGTCAGAAAT90.1799640071985603No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGGACCGTCAGAAAT80.15996800639872025No Hit
CGGAAGGATCATTACCAAACCAAAAACAATCCACGTGAACCGTCAGAAAT80.15996800639872025No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAGT80.15996800639872025No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAACCGTTTAAAT80.15996800639872025No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTTTAAAT80.15996800639872025No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTTTAAAT70.13997200559888023No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA70.13997200559888023No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACATGAACCGTCAGAAAT70.13997200559888023No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCTCGTGAACCGTTTAAAT70.13997200559888023No Hit
CGGAAGGATCATACCACACCAAAAACAATCCACGTGAACCGTCAGAAATA70.13997200559888023No Hit
CGGAAGGATCATTACCACACCAAAAACGATCCACGTGAACCGTCAGAAAT70.13997200559888023No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTTTAAAT60.11997600479904018No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTAAACCGTCAGAAAT60.11997600479904018No Hit
CGGAAGGATCATTACCACACCAAAAACAATCTACGTGAACCGTCAGAAAT60.11997600479904018No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC60.11997600479904018No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC60.11997600479904018No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)