FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OODve816.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OODve816.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2671
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC125847.09846499438412No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT49118.38262822912767No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTGAACA40915.312616997379259No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT511.9093972295020591No Hit
CGGAAGGATCATTACCACACCAAAAAACCATCCACGTGAACCGTTCAATA401.497566454511419No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA281.0482965181579933No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTTAAGC190.711344065892924No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTTAACA140.5241482590789966No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAC120.44926993635342566No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAC80.2995132909022838No Hit
CGGAAGGATCATTACCACACCAAAAAACCATCCACGTGAACCGTTCAATT80.2995132909022838No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTTGAACA70.2620741295394983No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC70.2620741295394983No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAC60.22463496817671283No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTTGAACAA60.22463496817671283No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTATCAACA50.18719580681392736No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTTGAACA50.18719580681392736No Hit
CGGAAGGATCATTACCCCACCTAAAAACTTTCCACGTGAACCGTATCAAC50.18719580681392736No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTCAGAAA50.18719580681392736No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC50.18719580681392736No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGGAAT50.18719580681392736No Hit
CGGAAGGATCATTACCAAACCTAAAAACTTTCCACGTGAACCGTATCAAC40.1497566454511419No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAC40.1497566454511419No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACCGTATCAAC40.1497566454511419No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAGCCGTCAGAAAT40.1497566454511419No Hit
TGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC40.1497566454511419No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTTGAACA40.1497566454511419No Hit
CGGAAGGATTATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC40.1497566454511419No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAC40.1497566454511419No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC40.1497566454511419No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTATCAACA30.11231748408835641No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTAAACA30.11231748408835641No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC30.11231748408835641No Hit
CGGGAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC30.11231748408835641No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC30.11231748408835641No Hit
CGGAAGGATCATTACCACACAAAAAACAATCCACGTGAACCGTCAGAAAT30.11231748408835641No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGGACCGTCAGAAAT30.11231748408835641No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT30.11231748408835641No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACAGTCAGAAAT30.11231748408835641No Hit
CGGAAGGATCATTACCACACCAAAAATAATCCACGTGAACCGTCAGAAAT30.11231748408835641No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAC30.11231748408835641No Hit
CGGAAGGACATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAACA30.11231748408835641No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAGT30.11231748408835641No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCATAAAT30.11231748408835641No Hit
CGGAAGGATCATTACCATACCTAAAAACTTTCCACGTGAACCGTATCAAC30.11231748408835641No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTGAACG30.11231748408835641No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTATCAAC30.11231748408835641No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)