FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OODve808.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OODve808.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1593
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAAGCAA54033.89830508474576No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGTTAACCAA32320.276208411801633No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAACCAA30419.083490269930948No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA674.205900816070308No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAATCAA543.389830508474576No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA332.0715630885122414No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCTATTAAAC130.8160703075957313No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTCAAAAAA90.5649717514124294No Hit
CGGAAGGATCATTACCACGCAAAAAACTATCCACGTGAACCGTTAAGCAA60.3766478342749529No Hit
CGGAAGGATCATTACCACGCCAAAAACTATACACGTGAACCGTTAAGCAA60.3766478342749529No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACGTAACGAGATCTC60.3766478342749529No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAGGCAA50.31387319522912743No Hit
CGGAAGGATCATTACCACGCCAAAAGCTATCCACGTGAACCGTTAAGCAA40.25109855618330196No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT40.25109855618330196No Hit
CGGAAGGATCATTAACACACCTAAAACTATCCACGTGAACCGTTAACCAA40.25109855618330196No Hit
CGGAAGGATCATTACCACGCCAAAAAAACTATCCACGTGAACCGTCAAAA40.25109855618330196No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGCGAACCGTTAAGCAA40.25109855618330196No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAAGCGA40.25109855618330196No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT30.18832391713747645No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAGCCGTTAACCAA30.18832391713747645No Hit
CGGAAGGATCATTACCACACATAAAACTATCCACGTGAACCGTTAACCAA30.18832391713747645No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAGCCGTTAAGCAA30.18832391713747645No Hit
CGGAAGGATCATTACCACGCCAAAAACTACCCACGTGAACCGTTAAGCAA30.18832391713747645No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTGAGCAA30.18832391713747645No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACAGTTAAGCAA30.18832391713747645No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGTTAAGCAA30.18832391713747645No Hit
CGGAAGGATCATTACCACGCCAAAACTATCCACGTGAACCGTTAAGCAAA30.18832391713747645No Hit
CGGAAGGATCATTAACACGCCAAAAACTATCCACGTGAACCGTTAAGCAA30.18832391713747645No Hit
CGGAAGGATCATTACCACGCCTAAAACTATCCACGTGAACCGTTAACCAA30.18832391713747645No Hit
CGGAAGGATCATTACCACGCCGAAAACTATCCACGTGAACCGTTAAGCAA30.18832391713747645No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACAGTTAACCAA30.18832391713747645No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTTAACCAA20.12554927809165098No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGGACCGTTAACCAA20.12554927809165098No Hit
CGGAAGGATCATACCACACCTAAAACTATCCACGTGAACCGTTAACCAAA20.12554927809165098No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAGCAA20.12554927809165098No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGCGAACCGTTAACCAA20.12554927809165098No Hit
CGGAAGGATCATTAACACGCCAAAAACTATCCACGTGAACCGTTAACCAA20.12554927809165098No Hit
CGGAAGGACATTACCACACCTAAAACTATCCACGTGAACCGTTAACCAAA20.12554927809165098No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACATGAACCGTTAAGCAA20.12554927809165098No Hit
CGGAAGGATTATTACCACACCTAAAACTATCCACGTGAACCGTTAACCAA20.12554927809165098No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTTAAGC20.12554927809165098No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGGACCGTTAACCAA20.12554927809165098No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTACATAC20.12554927809165098No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGCTAACCAA20.12554927809165098No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAGCCAA20.12554927809165098No Hit
CGGAAGGATCACTACCACGCCAAAAACTATCCACGTGAACCGTTAAGCAA20.12554927809165098No Hit
CGGAAGGATCATTACACGCCAAAAACTATCCACGTGAACCGTTAAGCAAA20.12554927809165098No Hit
CGGAAGGATCATTACCACCTAAAACTATCCACGTGAACCGTTAACCAAAC20.12554927809165098No Hit
CGGAAGGATCATTACCACACCCAAAACTATCCACGTGAACCGTTAACCAA20.12554927809165098No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGCGAACCGTTAACCAA20.12554927809165098No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAGCCGTTAACCAA20.12554927809165098No Hit
CGGAAGGATCATTACCACGCCAAAGACTATCCACGTGAACCGTTAAGCAA20.12554927809165098No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)