FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OODve807.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OODve807.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3977
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT153738.64722152376163No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA63115.866230827256725No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC41110.334422931858185No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT2837.115916519989943No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAACCGTATCAAC2596.5124465677646475No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCCCGTGAACCGTATCAAC551.3829519738496354No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCGCTTTGTATTG190.4777470455116922No Hit
CGGAAGGATCATTACCACCGGCAGCAGTGGATGTCTAGGCTCTGTCTCTT140.35202413879808897No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAGTGGATGTCTAGGCTCTGT140.35202413879808897No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTCGTAT130.3268795574553684No Hit
CGGAAGGATCATTACCACACCTAAAACCTTCCCCCGTGAACCGTATCAAC120.3017349761126477No Hit
CGGAAGGATCATTACCACATCTAAAAAATTTCCACGTGAACCGTATCAAA120.3017349761126477No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC110.2765903947699271No Hit
CGGAAGGATCATTACCACACAAAAAACTATCCACGTGAACCGCTTTGTAT110.2765903947699271No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGCTTTGTAT110.2765903947699271No Hit
CGGAAGGATCATTACCACTTGGCAGCAGTGGATGTCTAGGCTCTGTCTCT110.2765903947699271No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCTTTGTA110.2765903947699271No Hit
CGGAAGGATCATTAACACACCAAAAACTATCCACGTGAACCGCTTTGTAT100.2514458134272064No Hit
CGGAAGGATCATTACCACACCAAAAACTATACACGTGAACCGCTTTGTAT100.2514458134272064No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCCTTGTAT80.20115665074176514No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCGCTTTGTAT80.20115665074176514No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGCGAACCGCTTTGTAT80.20115665074176514No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAA80.20115665074176514No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACAGCTTTGTAT70.17601206939904449No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACAA70.17601206939904449No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTATCAAAC60.15086748805632386No Hit
CGGAAGGATCATTACCACACCAAAAACTACCCACGTGAACCGCTTTGTAT60.15086748805632386No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAA60.15086748805632386No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGGACCGCTTTGTAT60.15086748805632386No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGCAT60.15086748805632386No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGCTTTGTAT60.15086748805632386No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTCTGTAT60.15086748805632386No Hit
CGGAAGGATCATTACCACACAAAAAACAATCCACGTGAACCGTCAGAAAT60.15086748805632386No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTCCCCCGTGAACCGTATCAAC60.15086748805632386No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGCTTTGTA50.1257229067136032No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCGCGTGAACCGCTTTGTAT50.1257229067136032No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTATCAACA40.10057832537088257No Hit
CGGAAGGATCATTACCACACCAAAAACTATCACGTGAACCGCTTTGTATT40.10057832537088257No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAC40.10057832537088257No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGA40.10057832537088257No Hit
CGGAAGGATCATTACCACACCAAGAACTATCCACGTGAACCGCTTTGTAT40.10057832537088257No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAAACC40.10057832537088257No Hit
CGGAAGGATCATTAACACACCTAAAAACTTCCCCCGTGAACCGTATCAAC40.10057832537088257No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTGT40.10057832537088257No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAA40.10057832537088257No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAA40.10057832537088257No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAC40.10057832537088257No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCTACGTGAACCGTATCAAA40.10057832537088257No Hit
CGGAAGGATCATTACCACACCAAAAACGATCCACGTGAACCGTCAGAAAT40.10057832537088257No Hit
CGGAAGGATCATTACCCCACCAAAAACTATCCACGTGAACCGCTTTGTAT40.10057832537088257No Hit
CGGAAGGATCATTACCACACCAAAACTATCCACGTGAACCGCTTTGTATT40.10057832537088257No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC40.10057832537088257No Hit
CGGAAGGATCATACCACACCAAAAACTATCCACGTGAACCGCTTTGTATT40.10057832537088257No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT40.10057832537088257No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAA40.10057832537088257No Hit
CGGAAGGATCATTACCACACCAAAAACTGTCCACGTGAACCGCTTTGTAT40.10057832537088257No Hit
CGGAAGGATCATTACCACACCTAAAAACTCCCCCCGTGAACCGTATCAAC40.10057832537088257No Hit
CGGAAGGATCATTACCACACCAAAAGCTATCCACGTGAACCGCTTTGTAT40.10057832537088257No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)