FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OODve805.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OODve805.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1977
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA83142.03338391502276No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC32816.590794132524024No Hit
CGGAAGGATCATTACCACACCAAAAAAACTCATCCCACGTGAATTCGTAC1276.423874557410217No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCTATACCG783.9453717754172986No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTATCCACGTGAACCGTTGAAT381.9221041982802227No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC331.669195751138088No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACGTAACGAGATCTC301.5174506828528074No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT281.4162873039959536No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAACCTGTACTG281.4162873039959536No Hit
CGGAAGGATCATTACCACATCTCAGCAGTGGATGTCTAGGCTCTGTCTCT261.3151239251390996No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAGTGGATGTCTAGGCTCTGT261.3151239251390996No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAACAA100.5058168942842691No Hit
CGGAAGGATCATTAACACACCAAAAAACTATCCACGTGAACCGTTACATA100.5058168942842691No Hit
CGGAAGGATCATTACCACGTCGGCAGCAGTGGATGTCTAGGCTCTGTCTC100.5058168942842691No Hit
CGGAAGGATCATTACCACACAAAAAAACTATCCACGTGAACCGTTACATA100.5058168942842691No Hit
CGGAAGGATCATTACCACGCCAAAAAACTATCCACGTGAACCGTTACATA90.4552352048558422No Hit
CGGAAGGATCATTACCACATCCAGCAGTGGATGTCTAGGCTCTGTCTCTT90.4552352048558422No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAGCCGTTACATA70.3540718259989884No Hit
CGGAAGGATCATTACCACACCAAAAAACTACCCACGTGAACCGTTACATA70.3540718259989884No Hit
CGGAAGGATCATTACCACCAAAAAACTATCCACGTGAACCGTTACATACC60.30349013657056145No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA50.25290844714213456No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCGCGTGAACCGTTACATA50.25290844714213456No Hit
CGGAAGGATCATTACCACACCAAAAAATTATCCACGTGAACCGTTACATA50.25290844714213456No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTATCAAC50.25290844714213456No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAAACGTTACATA50.25290844714213456No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTATCAAC50.25290844714213456No Hit
CGGAAGGATCATTACCACACCAAGAAACTATCCACGTGAACCGTTACATA40.20232675771370764No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC40.20232675771370764No Hit
CGGAAGGATCATTACCACACCAAAGAACTATCCACGTGAACCGTTACATA40.20232675771370764No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACAGCAGTGGATGTC40.20232675771370764No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT40.20232675771370764No Hit
CGGAAGGATCATTAACACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT40.20232675771370764No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAC40.20232675771370764No Hit
CGGAAGGATCATTACCACACCAAACAACTATCCACGTGAACCGTTACATA30.15174506828528073No Hit
CGGAAGGATCATTACCACATCAAAAAACTATCCACGTGAACCGTTACATA30.15174506828528073No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACGTA30.15174506828528073No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTACATAC30.15174506828528073No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTATCAACA30.15174506828528073No Hit
CGGAAGGATCATTACCACACCAAAAAACTAACCACGTGAACCGTTACATA30.15174506828528073No Hit
CGGAAGGATCATTACCACACCAAAAAACTATTCACGTGAACCGTTACATA30.15174506828528073No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACATGAACCGTTACATA30.15174506828528073No Hit
CGGAAGGATCATTACCACACCTAAGAACTTTCCACGTGAACCGTATCAAC30.15174506828528073No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGCTACATA30.15174506828528073No Hit
CGGAAGGATCATTACCACACCAAAAGACTATCCACGTGAACCGTTACATA30.15174506828528073No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAC30.15174506828528073No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGTTACATA20.10116337885685382No Hit
CGGAAGGATCATTACCACCAAAAAAACTCATCCCACGTGAATTCGTACTG20.10116337885685382No Hit
CGGAAGGATCTTACCACACCAAAAAACTATCCACGTGAACCGTTACATAC20.10116337885685382No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGC20.10116337885685382No Hit
CGGAAGGACATTACCACACCAAAAAACTATCCACGTGAACCGTTACATAC20.10116337885685382No Hit
CGGAATGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA20.10116337885685382No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCACATA20.10116337885685382No Hit
CGGAAGGATCATTACCACACCAAAAAACCATCCACGTGAACCGTTACATA20.10116337885685382No Hit
CGGAAGGATCATTACCACGCCTAAAAAGCTATCCACGTGAACCGTTGAAT20.10116337885685382No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGGACCGTTACATA20.10116337885685382No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTAAACCGTTACATA20.10116337885685382No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAC20.10116337885685382No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACACA20.10116337885685382No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACCGTATCAAC20.10116337885685382No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC20.10116337885685382No Hit
CGGAAGGATCATTACCACACAAAAAACTATCCACGTGAACCGTTAAACAA20.10116337885685382No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC20.10116337885685382No Hit
CGGAAGGATCATTACCACACCAAAAAACCTCATCCCACGTGAATTCGTAC20.10116337885685382No Hit
CGGAAGGATCATTACCAAACCAAAAAACTATCCACGTGAACCGTTACATA20.10116337885685382No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTGAATG20.10116337885685382No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAC20.10116337885685382No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTATCCACGTGAACCGTCGAAT20.10116337885685382No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTATCCACGTGAACCGTTACAT20.10116337885685382No Hit
CGGAAGGATCATTACCACACCAAAAAAACTAATCCCACGTGAATTCGTAC20.10116337885685382No Hit
CGGAAGGATCATTACCACACCTAAAAAACTCATCCCACGTGAATTCGTAC20.10116337885685382No Hit
CGGAAGGATCATTACCAAACCAAAAAAACTCATCCCACGTGAATTCGTAC20.10116337885685382No Hit
CAGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA20.10116337885685382No Hit
CGGAAGGATCATTACCACACCAAAAAGCTATCCACGTGAACCGTTACATA20.10116337885685382No Hit
CGGAAGGATCATTACCACACCAAAAAAATATCCACGTGAACCGTTACATA20.10116337885685382No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCCTTATACA20.10116337885685382No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)